RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.29□□□□□ -0.6
SF3A3-204ENST00000462258 CNTNAP2Q9UHC6 1331 aa11.29□□□□□ -0.6
SF3A3-204ENST00000462258 GRXCR2A6NFK2 248 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 LRRIQ4A6NIV6 560 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 FSCN2O14926 492 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 AXLP30530 894 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 PRPHP41219 470 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 BCAR1P56945 870 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 ERVFC1P60507 584 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 DLX2Q07687 328 aaPredicted RBP11.28□□□□□ -0.6
SF3A3-204ENST00000462258 CLUL1Q15846 466 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 AMHR2Q16671 573 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 CDCA2Q69YH5 1023 aaPredicted RBP11.28□□□□□ -0.6
SF3A3-204ENST00000462258 PADI6Q6TGC4 694 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 AGMOQ6ZNB7 445 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 RBM23Q86U06 439 aaKnown RBP11.28□□□□□ -0.6
SF3A3-204ENST00000462258 EFHBQ8N7U6 833 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 IGSF22Q8N9C0 903 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 URGCPQ8TCY9 931 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 MICAL1Q8TDZ2 1067 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 TMEM169Q96HH4 297 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 CPB2Q96IY4 423 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 SPG21Q9NZD8 308 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 PUF60Q9UHX1 559 aaKnown RBP11.28□□□□□ -0.6
SF3A3-204ENST00000462258 FAM50BQ9Y247 325 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 STK24Q9Y6E0 443 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 MYH15Q9Y2K3 1946 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 MYH11P35749 1972 aa11.28□□□□□ -0.6
SF3A3-204ENST00000462258 C5orf42Q9H799 3197 aa11.27□□□□□ -0.6
SF3A3-204ENST00000462258 FSD2A1L4K1 749 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 CARNS1A5YM72 827 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 PP2D1A8MPX8 630 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 B4GALT5O43286 388 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 OFD1O75665 1012 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 GLP2RO95838 553 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 ARF4P18085 180 aaPredicted RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 NCLP19338 710 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 ATP2C1P98194 919 aaPredicted RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 KRT17Q04695 432 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 RNASELQ05823 741 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 NCBP1Q09161 790 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 SMAD4Q13485 552 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 ECM1Q16610 540 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 KRT79Q5XKE5 535 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 PDE12Q6L8Q7 609 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 DTHD1Q6ZMT9 781 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 MRPL10Q7Z7H8 261 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 TMEM173Q86WV6 379 aaPredicted RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 ZBTB8OSQ8IWT0 167 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 SMG8Q8ND04 991 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 CDCA3Q99618 268 aaPredicted RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 EIF2AQ9BY44 585 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 TRIM6Q9C030 488 aaPredicted RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 GBP3Q9H0R5 595 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 BHMT2Q9H2M3 363 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 NRDE2Q9H7Z3 1164 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 DDX19AQ9NUU7 478 aaKnown RBP11.27□□□□□ -0.61
SF3A3-204ENST00000462258 CD207Q9UJ71 328 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 KIAA1024Q9UPX6 916 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 IPPQ9Y573 584 aa11.27□□□□□ -0.61
SF3A3-204ENST00000462258 NT5C1B-RDH14C9J2C7 533 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 MBTPS2O43462 519 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 B4GALT3O60512 393 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 ITGA4P13612 1032 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 CYP11B2P19099 503 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 MLH1P40692 756 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 NAMPTP43490 491 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 ADAM15Q13444 863 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 PDIA5Q14554 519 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 SMC1AQ14683 1233 aaKnown RBP11.26□□□□□ -0.61
SF3A3-204ENST00000462258 IL17AQ16552 155 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 DUSP6Q16828 381 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 SLC27A1Q6PCB7 646 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 FAM178BQ8IXR5 827 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 HACE1Q8IYU2 909 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 BSNDQ8WZ55 320 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 PRIMPOLQ96LW4 560 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 BACH2Q9BYV9 841 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 CSRNP2Q9H175 543 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 C2orf40Q9H1Z8 148 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 NXF3Q9H4D5 531 aaKnown RBP11.26□□□□□ -0.61
SF3A3-204ENST00000462258 TLE6Q9H808 572 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 NGRNQ9NPE2 291 aaKnown RBP11.26□□□□□ -0.61
SF3A3-204ENST00000462258 UBN1Q9NPG3 1134 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 PRMT7Q9NVM4 692 aaPredicted RBP11.26□□□□□ -0.61
SF3A3-204ENST00000462258 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
SF3A3-204ENST00000462258 BARX2Q9UMQ3 279 aaPredicted RBP11.26□□□□□ -0.61
SF3A3-204ENST00000462258 HIDE1A8MVS5 230 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 E9PMD0 336 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 PER2O15055 1255 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 NPTXRO95502 500 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 POMCP01189 267 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 GALTP07902 379 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 SRGAP2BP0DMP2 458 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 SSTR3P32745 418 aaPredicted RBP11.25□□□□□ -0.61
SF3A3-204ENST00000462258 CA8P35219 290 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 SLC11A1P49279 550 aa11.25□□□□□ -0.61
SF3A3-204ENST00000462258 AFF1P51825 1210 aaKnown RBP11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms