RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 MAEAQ7L5Y9 396 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 CCDC51Q96ER9 411 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 TCF25Q9BQ70 676 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 CD320Q9NPF0 282 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 ENTPD7Q9NQZ7 604 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 FAM50BQ9Y247 325 aa21■□□□□ 0.95
COL5A1-203ENST00000460264 C5orf42Q9H799 3197 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 ARHGEF35A5YM69 484 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 LAD1O00515 517 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 PER2O15055 1255 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 NCLP19338 710 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 CCT6AP40227 531 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 ALDH7A1P49419 539 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 ECM1Q16610 540 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 PADI6Q6TGC4 694 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 IGSF22Q8N9C0 903 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 SMG8Q8ND04 991 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 CPB2Q96IY4 423 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 MSLNLQ96KJ4 702 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 RSAD1Q9HA92 442 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 CLEC1BQ9P126 229 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 LRWD1Q9UFC0 647 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 CD207Q9UJ71 328 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 TDRD15B5MCY1 1934 aaKnown RBP20.99■□□□□ 0.95
COL5A1-203ENST00000460264 CNTNAP2Q9UHC6 1331 aa20.99■□□□□ 0.95
COL5A1-203ENST00000460264 LRRIQ4A6NIV6 560 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 ARF4P18085 180 aaPredicted RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 RNASELQ05823 741 aaKnown RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 NCBP1Q09161 790 aaKnown RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 SMAD4Q13485 552 aaKnown RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 PDIA5Q14554 519 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 DUSP6Q16828 381 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 CDCA2Q69YH5 1023 aaPredicted RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 TMEM173Q86WV6 379 aaPredicted RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 URGCPQ8TCY9 931 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 CDCA3Q99618 268 aaPredicted RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 EIF2AQ9BY44 585 aaKnown RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 RAB34Q9BZG1 259 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 NRDE2Q9H7Z3 1164 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 BARX2Q9UMQ3 279 aaPredicted RBP20.98■□□□□ 0.95
COL5A1-203ENST00000460264 IPPQ9Y573 584 aa20.98■□□□□ 0.95
COL5A1-203ENST00000460264 FSD2A1L4K1 749 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 CARNS1A5YM72 827 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 NT5C1B-RDH14C9J2C7 533 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 H3BQV1 296 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 B4GALT5O43286 388 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 MBTPS2O43462 519 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 B4GALT3O60512 393 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 CYP11B2P19099 503 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 PRPHP41219 470 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 AFF1P51825 1210 aaKnown RBP20.97■□□□□ 0.95
COL5A1-203ENST00000460264 IL17AQ16552 155 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 RILPL1Q5EBL4 403 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 CNNM3Q8NE01 707 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 VN1R2Q8NFZ6 395 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 SNX29Q8TEQ0 813 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 TMEM169Q96HH4 297 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 CSRNP2Q9H175 543 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 NGRNQ9NPE2 291 aaKnown RBP20.97■□□□□ 0.95
COL5A1-203ENST00000460264 DNAJB4Q9UDY4 337 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 SMC3Q9UQE7 1217 aa20.97■□□□□ 0.95
COL5A1-203ENST00000460264 HIDE1A8MVS5 230 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 ITGA4P13612 1032 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 RBM10P98175 930 aaKnown RBP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 ZP2Q05996 745 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 SMAD2Q15796 467 aaKnown RBP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 TMC7Q7Z402 723 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 ZNF280BQ86YH2 543 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 GJD3Q8N144 294 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 BCL7CQ8WUZ0 217 aaPredicted RBP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 BSNDQ8WZ55 320 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 KHSRPQ92945 711 aaKnown RBP eCLIP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 GBP3Q9H0R5 595 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 DDX19AQ9NUU7 478 aaKnown RBP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 PRKAG3Q9UGI9 489 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 KIAA1024Q9UPX6 916 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 HES2Q9Y543 173 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.96■□□□□ 0.95
COL5A1-203ENST00000460264 STK24Q9Y6E0 443 aa20.96■□□□□ 0.95
COL5A1-203ENST00000460264 PP2D1A8MPX8 630 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 INPPL1O15357 1258 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 EYA4O95677 639 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 GALTP07902 379 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 SLC11A1P49279 550 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 COASYQ13057 564 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 SMC1AQ14683 1233 aaKnown RBP20.95■□□□□ 0.94
COL5A1-203ENST00000460264 PPP4R3CPQ6ZMV5 832 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 ADHFE1Q8IWW8 467 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 SMRP1Q8NCR6 262 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 IGSF21Q96ID5 467 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 BHMT2Q9H2M3 363 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 UBN1Q9NPG3 1134 aa20.95■□□□□ 0.94
COL5A1-203ENST00000460264 PRMT7Q9NVM4 692 aaPredicted RBP20.95■□□□□ 0.94
COL5A1-203ENST00000460264 DDHD2O94830 711 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 SSTR3P32745 418 aaPredicted RBP20.94■□□□□ 0.94
COL5A1-203ENST00000460264 ATP2C1P98194 919 aaPredicted RBP20.94■□□□□ 0.94
COL5A1-203ENST00000460264 KCNC3Q14003 757 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 SLC27A1Q6PCB7 646 aa20.94■□□□□ 0.94
COL5A1-203ENST00000460264 DTHD1Q6ZMT9 781 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms