RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 DRD4P21917 467 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 RDXP35241 583 aaKnown RBP21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 DAB2IPQ5VWQ8 1189 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 MOXD1Q6UVY6 613 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 TMEM179Q6ZVK1 233 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 LRRC34Q8IZ02 419 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 CHMP6Q96FZ7 201 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 CARD9Q9H257 536 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 ANKRD62A6NC57 917 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 HHIPL2Q6UWX4 724 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 ZKSCAN4Q969J2 545 aaPredicted RBP21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 CSRNP1Q96S65 589 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 PCDHB18PQ96TA0 734 aa21.11■□□□□ 0.97
CNEP1R1-203ENST00000458059 CLRN2A0PK11 232 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 TCP10L2B9ZVM9 353 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 CYP26A1O43174 497 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 CREB1P16220 341 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 LONRF1Q17RB8 773 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 RBM26Q5T8P6 1007 aaKnown RBP21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 C1orf54Q8WWF1 131 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 MKL1Q969V6 931 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 TBC1D31Q96DN5 1066 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 PABPC3Q9H361 631 aaKnown RBP21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 GPRC5CQ9NQ84 441 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 NCANO14594 1321 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 DLATP10515 647 aaKnown RBP21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 MAP2K1Q02750 393 aaPredicted RBP21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 CYB5D1Q6P9G0 228 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 DDX23Q9BUQ8 820 aaKnown RBP21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 INTUQ9ULD6 942 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 RPTORQ8N122 1335 aa21.1■□□□□ 0.97
CNEP1R1-203ENST00000458059 GTPBP10A4D1E9 387 aaKnown RBP21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 PSMD10O75832 226 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 MAP2K2P36507 400 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 NPEPPSP55786 919 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 YTHDF3Q7Z739 585 aaKnown RBP21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 SLC47A2Q86VL8 602 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 HOOK3Q86VS8 718 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 C1orf131Q8NDD1 294 aaKnown RBP21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 PWWP2AQ96N64 755 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 BHMG1C9JSJ3 638 aaPredicted RBP21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 PRELPP51888 382 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 SMTNP53814 917 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 SYT11Q9BT88 431 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 KIFC3Q9BVG8 833 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 INTS9Q9NV88 658 aaKnown RBP21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 GRHL1Q9NZI5 618 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 ATAD5Q96QE3 1844 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 PPP1R7Q15435 360 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 CCDC91Q7Z6B0 441 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 FUKQ8N0W3 1084 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 DAW1Q8N136 415 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 ANKRD42Q8N9B4 389 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 ATG4AQ8WYN0 398 aa21.09■□□□□ 0.97
CNEP1R1-203ENST00000458059 RASSF9O75901 435 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 SSTR3P32745 418 aaPredicted RBP21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 CIITAP33076 1130 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 STAT2P52630 851 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 LLGL2Q6P1M3 1020 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 EIF1ADQ8N9N8 165 aaKnown RBP21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 SEC14L1Q92503 715 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 TLCD1Q96CP7 247 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 SAAL1Q96ER3 474 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 FAM129AQ9BZQ8 928 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 TMX4Q9H1E5 349 aaPredicted RBP21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 CTNNAL1Q9UBT7 734 aa21.08■□□□□ 0.97
CNEP1R1-203ENST00000458059 EIF3DO15371 548 aaKnown RBP eCLIP21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 CLSTN1O94985 981 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 ERMARDQ5T6L9 678 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 HIBCHQ6NVY1 386 aaPredicted RBP21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 PNMA8AQ86V59 439 aaPredicted RBP21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 TCP11Q8WWU5 503 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 DHX38Q92620 1227 aaKnown RBP21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 PAGR1Q9BTK6 254 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 HOMER2Q9NSB8 354 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 RASAL2Q9UJF2 1139 aa21.08■□□□□ 0.96
CNEP1R1-203ENST00000458059 ECM2O94769 699 aaPredicted RBP21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 TRIM37O94972 964 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 PADI6Q6TGC4 694 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 SEPT14Q6ZU15 432 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 NOP9Q86U38 636 aaKnown RBP21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 UBL4BQ8N7F7 174 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 PLEKHO2Q8TD55 490 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 DYDC1Q8WWB3 177 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 ZDHHC15Q96MV8 337 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 NCAPGQ9BPX3 1015 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 ADAM7Q9H2U9 754 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 BAIAP2L1Q9UHR4 511 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 FOCADQ5VW36 1801 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 CLDN3O15551 220 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 PHF2O75151 1096 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 CYP3A4P08684 503 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 POLR2MP0CAP2 368 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 BCRP11274 1271 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 GRIPAP1Q4V328 841 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 SEL1L2Q5TEA6 688 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 CDAN1Q8IWY9 1227 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 KIRREL3Q8IZU9 778 aa21.07■□□□□ 0.96
CNEP1R1-203ENST00000458059 CCDC197Q8NCU1 140 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms