RNA–Protein interactions for RNA: ENST00000457373.5

RFX3-210, Transcript of regulatory factor X3, human

TSL 5

Gene RFX3, Length 822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-210	ENST00000457373	POU5F1B	Q06416	359 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	RRAGB	Q5VZM2	374 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	TWF2	Q6IBS0	349 aa	Known RBP	11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	NPAS4	Q8IUM7	802 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	ZBTB8OS	Q8IWT0	167 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	RNF169	Q8NCN4	708 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	DEPTOR	Q8TB45	409 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	KCNG4	Q8TDN1	519 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	KIFAP3	Q92845	792 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	CPB2	Q96IY4	423 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	CHST12	Q9NRB3	414 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	MTMR10	Q9NXD2	777 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	DACT1	Q9NYF0	836 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	PCDHA7	Q9UN72	937 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	PCDHGA10	Q9Y5H3	936 aa		11.15	□□□□□ -0.62
RFX3-210	ENST00000457373	LINC01553	A4QN01	128 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	CCDC169	A6NNP5	214 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	DGKI	O75912	1065 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	KRT18	P05783	430 aa	Known RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	DDIT3	P35638	169 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	ANP32A	P39687	249 aa	Known RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	NAMPT	P43490	491 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	ME1	P48163	572 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	KRT85	P78386	507 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	NUCB2	P80303	420 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	FAM189B	P81408	668 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	TAP1	Q03518	808 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	MBTD1	Q05BQ5	628 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	NCBP1	Q09161	790 aa	Known RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	GRIN2C	Q14957	1233 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	PPP2R5A	Q15172	486 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	LONRF3	Q496Y0	759 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	PAN2	Q504Q3	1202 aa	Known RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	FAM43B	Q6ZT52	329 aa	Predicted RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	SPRED2	Q7Z698	418 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	GPBP1	Q86WP2	473 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	ECHDC2	Q86YB7	292 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	FIBCD1	Q8N539	461 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	PDILT	Q8N807	584 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	LARP4B	Q92615	738 aa	Known RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	POM121	Q96HA1	1249 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	SPATA32	Q96LK8	384 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	DRC1	Q96MC2	740 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	KIFC3	Q9BVG8	833 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	PRDM12	Q9H4Q4	367 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	AGPAT5	Q9NUQ2	364 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	TMEM161A	Q9NX61	479 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	RCOR1	Q9UKL0	485 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	MTUS1	Q9ULD2	1270 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	ATP6V1D	Q9Y5K8	247 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	NLRC5	Q86WI3	1866 aa		11.14	□□□□□ -0.63
RFX3-210	ENST00000457373	HAX1	O00165	279 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	RFXAP	O00287	272 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	TSPAN1	O60635	241 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	FGFR1	P11362	822 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	GUCY2C	P25092	1073 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	STAT6	P42226	847 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	MAPK7	Q13164	816 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	BTG3	Q14201	252 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ARSH	Q5FYA8	562 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	SHC4	Q6S5L8	630 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	CCDC73	Q6ZRK6	1079 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	DYM	Q7RTS9	669 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	CDR2L	Q86X02	465 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	DAW1	Q8N136	415 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	CRIPAK	Q8N1N5	446 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	SP7	Q8TDD2	431 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	MYLIP	Q8WY64	445 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ARNTL2	Q8WYA1	636 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ZNF689	Q96CS4	500 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	GUCD1	Q96NT3	240 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	CDX2	Q99626	313 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	C17orf80	Q9BSJ5	609 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	TIPIN	Q9BVW5	301 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	NFKBIZ	Q9BYH8	718 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	C2orf40	Q9H1Z8	148 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ZHX3	Q9H4I2	956 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ELAC1	Q9H777	363 aa	Known RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	KMT5A	Q9NQR1	393 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	FAM105A	Q9NUU6	356 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	PRMT7	Q9NVM4	692 aa	Predicted RBP	11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	STK17A	Q9UEE5	414 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	USP20	Q9Y2K6	914 aa		11.13	□□□□□ -0.63
RFX3-210	ENST00000457373	ADGRA3	Q8IWK6	1321 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373		A0A087X0B3	334 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373		A0A0U1RQF3	1178 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	TBKBP1	A7MCY6	615 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373		K7ERI5	159 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	SLC16A4	O15374	487 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	B4GALT5	O43286	388 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	FAM13A	O94988	1023 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	PRKCB	P05771	671 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	ARF4	P18085	180 aa	Predicted RBP	11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	AXL	P30530	894 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	HOXA11	P31270	313 aa	Predicted RBP	11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	NPTX2	P47972	431 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	GIT2	Q14161	759 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	MAPK6	Q16659	721 aa		11.12	□□□□□ -0.63
RFX3-210	ENST00000457373	NAALADL2	Q58DX5	795 aa		11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms