RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CCDC188H7C350 402 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 ZNF12P17014 697 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 ENPP1P22413 925 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 KIF11P52732 1056 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 DPYDQ12882 1025 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 KAZNQ674X7 775 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 MCF2L2Q86YR7 1114 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 GABPB2Q8TAK5 448 aaPredicted RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 LPIN2Q92539 896 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 FNBP1Q96RU3 617 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 NEURL2Q9BR09 285 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 SLITRK6Q9H5Y7 841 aa11.48□□□□□ -0.57
LINC00342-202ENST00000448494 C6orf203Q9P0P8 240 aaPredicted RBP11.48□□□□□ -0.57
LINC00342-202ENST00000448494 LOC105371267A0A1B0GV96 52 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PIK3CDO00329 1044 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 KMOO15229 486 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CNOT3O75175 753 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 TRMUO75648 421 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 GPC3P51654 580 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CDR2Q01850 454 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CYTH1Q15438 398 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CCDC14Q49A88 953 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 WDR45BQ5MNZ6 344 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 MEI1Q5TIA1 1274 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PPP2R2DQ66LE6 453 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 MFSD5Q6N075 450 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 KRT26Q7Z3Y9 468 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 RHOT2Q8IXI1 618 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ACMSDQ8TDX5 336 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 EME1Q96AY2 570 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 UNKQ9C0B0 810 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ANKRD2Q9GZV1 360 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ZMYND12Q9H0C1 365 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 NLRC4Q9NPP4 1024 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 USP40Q9NVE5 1235 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ARHGEF28Q8N1W1 1705 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 MYH10P35580 1976 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ZNF862O60290 1169 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 GNA11P29992 359 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 S100A5P33763 92 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 SERPINB6P35237 376 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PPARGP37231 505 aaPredicted RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 LIFRP42702 1097 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 MAGEA1P43355 309 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 SHROOM1Q2M3G4 852 aaPredicted RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CGB2Q6NT52 195 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 CAPN12Q6ZSI9 719 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ACTRT1Q8TDG2 376 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PRPF31Q8WWY3 499 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ARHGEF2Q92974 986 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PAGE5Q96GU1 130 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 ZFRQ96KR1 1074 aaKnown RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 FMO2Q99518 471 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 C2orf49Q9BVC5 232 aaPredicted RBP11.47□□□□□ -0.57
LINC00342-202ENST00000448494 EPB41L4BQ9H329 900 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 GID8Q9NWU2 228 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 PLK2Q9NYY3 685 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 A2ML1A8K2U0 1454 aa11.47□□□□□ -0.57
LINC00342-202ENST00000448494 NOTOA8MTQ0 251 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 DAPK3O43293 454 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 TUFMP49411 452 aaKnown RBP11.46□□□□□ -0.57
LINC00342-202ENST00000448494 EIF2B2P49770 351 aaKnown RBP11.46□□□□□ -0.57
LINC00342-202ENST00000448494 WASHC5Q12768 1159 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 KCNMA1Q12791 1236 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 MED21Q13503 144 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 MCMDC2Q4G0Z9 681 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 RFWD3Q6PCD5 774 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 DSTYKQ6XUX3 929 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 CYB5R4Q7L1T6 521 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 VASH1Q7L8A9 365 aaPredicted RBP11.46□□□□□ -0.57
LINC00342-202ENST00000448494 HDGFL2Q7Z4V5 671 aaPredicted RBP11.46□□□□□ -0.57
LINC00342-202ENST00000448494 FAM20CQ8IXL6 584 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 MTMR8Q96EF0 704 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 MAGEB18Q96M61 343 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 BIRC8Q96P09 236 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 TUBB6Q9BUF5 446 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 DDX47Q9H0S4 455 aaKnown RBP11.46□□□□□ -0.57
LINC00342-202ENST00000448494 GJB4Q9NTQ9 266 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 FKBP14Q9NWM8 211 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 CHKBQ9Y259 395 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 ALKQ9UM73 1620 aa11.46□□□□□ -0.57
LINC00342-202ENST00000448494 NPHP3-ACAD11A0A0J9YXS1 232 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 ANKRD34BA5PLL1 514 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 SOBPA7XYQ1 873 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 DKC1O60832 514 aaKnown RBP eCLIP11.46□□□□□ -0.58
LINC00342-202ENST00000448494 PABPC1P11940 636 aaKnown RBP11.46□□□□□ -0.58
LINC00342-202ENST00000448494 PRCPP42785 496 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 ASPHQ12797 758 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 RASGRF1Q13972 1273 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 KRT40Q6A162 431 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 SMYD4Q8IYR2 804 aaPredicted RBP11.46□□□□□ -0.58
LINC00342-202ENST00000448494 GIN1Q9NXP7 522 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 SALL4Q9UJQ4 1053 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 GTF3C4Q9UKN8 822 aa11.46□□□□□ -0.58
LINC00342-202ENST00000448494 PLAGL2Q9UPG8 496 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms