RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 KREMEN1Q96MU8 473 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 NEUROG2Q9H2A3 272 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 NENFQ9UMX5 172 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 NOC2LQ9Y3T9 749 aaKnown RBP16.04■□□□□ 0.16
SF1-211ENST00000448404 STK24Q9Y6E0 443 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 GOLGA6BA6NDN3 693 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TRIM66O15016 1216 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TNFAIP3P21580 790 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 CNGA1P29973 690 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 FLT3P36888 993 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TREML2Q5T2D2 321 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 SEPT14Q6ZU15 432 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 SCYL3Q8IZE3 742 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 XXYLT1Q8NBI6 393 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TMEM161BQ8NDZ6 487 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 OR2W6PQ8NHA6 318 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TAS1R2Q8TE23 839 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 TATDN2Q93075 761 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 ZBTB10Q96DT7 871 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 ACCSQ96QU6 501 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 ATAD5Q96QE3 1844 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 WDR64B1ANS9 1081 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 CLSTN1O94985 981 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 FERP16591 822 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 PSMC5P62195 406 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 ERVK-9P63128 1117 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 SNRNP35Q16560 246 aaKnown RBP16.04■□□□□ 0.16
SF1-211ENST00000448404 PAXIP1Q6ZW49 1069 aaPredicted RBP16.04■□□□□ 0.16
SF1-211ENST00000448404 RPUSD2Q8IZ73 545 aaKnown RBP16.04■□□□□ 0.16
SF1-211ENST00000448404 LRRC4CQ9HCJ2 640 aa16.04■□□□□ 0.16
SF1-211ENST00000448404 KIF13BQ9NQT8 1826 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 HARSP12081 509 aaKnown RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 HLTFQ14527 1009 aaKnown RBP eCLIP16.03■□□□□ 0.16
SF1-211ENST00000448404 ZBTB41Q5SVQ8 909 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 CCDC70Q6NSX1 233 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 STXBP4Q6ZWJ1 553 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 NT5DC3Q86UY8 548 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 VSIG10LQ86VR7 867 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 TMEM130Q8N3G9 435 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 KRT35Q92764 455 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 ZBTB45Q96K62 511 aaPredicted RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 XPNPEP1Q9NQW7 623 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 LCMT1Q9UIC8 334 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 FTLP02792 175 aaPredicted RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 ZBTB48P10074 688 aaPredicted RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 MXI1P50539 228 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 IRX3P78415 501 aaPredicted RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 GPS2Q13227 327 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 MAP9Q49MG5 647 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 NOP9Q86U38 636 aaKnown RBP16.03■□□□□ 0.16
SF1-211ENST00000448404 REPS2Q8NFH8 660 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 ALG3Q92685 438 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 TRIM51Q9BSJ1 452 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 SYT11Q9BT88 431 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 DPH5Q9H2P9 285 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 TBC1D22BQ9NU19 505 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 TBX20Q9UMR3 447 aa16.03■□□□□ 0.16
SF1-211ENST00000448404 MMEP08473 750 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 SPOPLQ6IQ16 392 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 ZNF572Q7Z3I7 529 aaPredicted RBP16.02■□□□□ 0.16
SF1-211ENST00000448404 VPS36Q86VN1 386 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 FAM213AQ9BRX8 229 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 MKNK1Q9BUB5 465 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 MOV10L1Q9BXT6 1211 aaKnown RBP16.02■□□□□ 0.16
SF1-211ENST00000448404 ERVK-5Q9HDB9 667 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 KMT5AQ9NQR1 393 aa16.02■□□□□ 0.16
SF1-211ENST00000448404 GTPBP10A4D1E9 387 aaKnown RBP16.02■□□□□ 0.15
SF1-211ENST00000448404 KRIT1O00522 736 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 FGGP02679 453 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 KCNA2P16389 499 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 ACOT2P49753 483 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 TGFB2P61812 414 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 POMGNT1Q8WZA1 660 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 PCDHA10Q9Y5I2 948 aa16.02■□□□□ 0.15
SF1-211ENST00000448404 BZW2Q9Y6E2 419 aaKnown RBP16.02■□□□□ 0.15
SF1-211ENST00000448404 TTLL13PA6NNM8 815 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 HNRNPDLO14979 420 aaKnown RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 TTI1O43156 1089 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 ECM2O94769 699 aaPredicted RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 HOXA7P31268 230 aaPredicted RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 GTF2BQ00403 316 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 PRKCEQ02156 737 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 TMEM63BQ5T3F8 832 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 TAS1R3Q7RTX0 852 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 C4orf19Q8IY42 314 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 CTNNBL1Q8WYA6 563 aaPredicted RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 BICD1Q96G01 975 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 ZIM3Q96PE6 472 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 AGPAT1Q99943 283 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 TRIM7Q9C029 511 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 CYP39A1Q9NYL5 469 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 SART1O43290 800 aaKnown RBP16.01■□□□□ 0.15
SF1-211ENST00000448404 ACTR2P61160 394 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 TUBB4BP68371 445 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 DRP2Q13474 957 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 ARHGAP27Q6ZUM4 889 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 TXLNBQ8N3L3 684 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 FAM71BQ8TC56 605 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 GLG1Q92896 1179 aa16.01■□□□□ 0.15
SF1-211ENST00000448404 RASSF4Q9H2L5 321 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms