RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 RIN2Q8WYP3 895 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 HPS3Q969F9 1004 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 UIMC1Q96RL1 719 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 SPATA25Q9BR10 227 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 GTPBP4Q9BZE4 634 aaKnown RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 SLC12A5Q9H2X9 1139 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 BARX1Q9HBU1 254 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 PRDM11Q9NQV5 511 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 OBP2AQ9NY56 170 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 DNM3Q9UQ16 869 aa5.63□□□□□ -1.51
HMGB1P16-201ENST00000447155 C9orf118A6NHY6 69 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 FAM171A2A8MVW0 826 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 FFAR3O14843 346 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 AP1G1O43747 822 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 PHF2O75151 1096 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 GSPT1P15170 499 aaKnown RBP5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 CSF2RBP32927 897 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 AFF3P51826 1226 aaKnown RBP5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 PPP3CAQ08209 521 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 MGAT2Q10469 447 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 USP10Q14694 798 aaKnown RBP5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 PCOLCEQ15113 449 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZNF827Q17R98 1081 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 GLIPR1L2Q4G1C9 344 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 ATAT1Q5SQI0 421 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZNF648Q5T619 568 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 MCTP2Q6DN12 878 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 OGFOD2Q6N063 350 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 B3GNT9Q6UX72 402 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 USP45Q70EL2 814 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 TAS1R1Q7RTX1 841 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 CLEC14AQ86T13 490 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 PRR18Q8N4B5 295 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 TXNDC5Q8NBS9 432 aaKnown RBP5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 SLC35G2Q8TBE7 412 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 LPPQ93052 612 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 RUNDC1Q96C34 613 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 DMRT3Q9NQL9 472 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 GABBR1Q9UBS5 961 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 ADAM29Q9UKF5 820 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 LIMCH1Q9UPQ0 1083 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 IPPQ9Y573 584 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 RPTORQ8N122 1335 aa5.62□□□□□ -1.51
HMGB1P16-201ENST00000447155 CCDC154A6NI56 674 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 NPIPB6E9PJ23 425 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 PAX4O43316 350 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 HTRA2O43464 458 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 EIF5BO60841 1220 aaKnown RBP5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 KIF21BO75037 1637 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 CAND2O75155 1236 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 CTSSP25774 331 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 DEKP35659 375 aaKnown RBP5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 RAP1GAPP47736 663 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 MRE11P49959 708 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 GOLGA3Q08378 1498 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 GBX1Q14549 363 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 C19orf54Q5BKX5 351 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZMAT1Q5H9K5 638 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 MIGA2Q7L4E1 593 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 DGKHQ86XP1 1220 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 CCDC146Q8IYE0 955 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 LINC01356Q8N9X3 169 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 PIK3C3Q8NEB9 887 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 ADAMTS17Q8TE56 1095 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 SNX33Q8WV41 574 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 HDAC10Q969S8 669 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 MVB12AQ96EY5 273 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 TAAR9Q96RI9 348 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 MAP3K14Q99558 947 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 C1orf112Q9NSG2 853 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 INTUQ9ULD6 942 aa5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 CTDP1Q9Y5B0 961 aaPredicted RBP5.61□□□□□ -1.51
HMGB1P16-201ENST00000447155 A0A1B0GTL3 188 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 CCDC194A0A1B0GVG4 234 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 AKR1B10O60218 316 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 PRAMEF4O60810 478 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 EDNRBP24530 442 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 WNT3AP56704 352 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 ADAM15Q13444 863 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 ZNF267Q14586 743 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 NOMO1Q15155 1222 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 UBE3CQ15386 1083 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 PKN1Q16512 942 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 ARHGAP29Q52LW3 1261 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 GRAMD1CQ8IYS0 662 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 ADGRG2Q8IZP9 1017 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 MARCH10Q8NA82 808 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 PLA2G15Q8NCC3 412 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 DPF2Q92785 391 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 HOXB13Q92826 284 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 GCDHQ92947 438 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 SLC7A6OSQ96CW6 309 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 C1GALT1C1Q96EU7 318 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 LCORQ96JN0 433 aaPredicted RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 C7orf25Q9BPX7 421 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 KIAA1683Q9H0B3 1180 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 OR10A2Q9H208 303 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 C14orf93Q9H972 538 aaKnown RBP5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 FAM184BQ9ULE4 1060 aa5.6□□□□□ -1.51
HMGB1P16-201ENST00000447155 CFAP20Q9Y6A4 193 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms