RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 RSPH10BP0C881 870 aa15□□□□□ -0.01
VPS52-212ENST00000445902 CHRNA3P32297 505 aa15□□□□□ -0.01
VPS52-212ENST00000445902 PTDSS1P48651 473 aaKnown RBP15□□□□□ -0.01
VPS52-212ENST00000445902 PSMC6P62333 389 aa15□□□□□ -0.01
VPS52-212ENST00000445902 RRP1BQ14684 758 aaKnown RBP15□□□□□ -0.01
VPS52-212ENST00000445902 KYNUQ16719 465 aa15□□□□□ -0.01
VPS52-212ENST00000445902 TEX9Q8N6V9 391 aa15□□□□□ -0.01
VPS52-212ENST00000445902 STK32AQ8WU08 396 aa15□□□□□ -0.01
VPS52-212ENST00000445902 GPCPD1Q9NPB8 672 aa15□□□□□ -0.01
VPS52-212ENST00000445902 INTUQ9ULD6 942 aa15□□□□□ -0.01
VPS52-212ENST00000445902 NCANO14594 1321 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 FOXN2P32314 431 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 DRG2P55039 364 aaKnown RBP14.99□□□□□ -0.01
VPS52-212ENST00000445902 POLE2P56282 527 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 MESDQ14696 234 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 PPP2R5EQ16537 467 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 KNOP1Q1ED39 458 aaKnown RBP14.99□□□□□ -0.01
VPS52-212ENST00000445902 MFSD5Q6N075 450 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 ZNF746Q6NUN9 644 aaPredicted RBP14.99□□□□□ -0.01
VPS52-212ENST00000445902 PRUNE1Q86TP1 453 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 CLEC10AQ8IUN9 316 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 CEP95Q96GE4 821 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 PITPNM3Q9BZ71 974 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 KIAA1683Q9H0B3 1180 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 CYP39A1Q9NYL5 469 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 LRRC42Q9Y546 428 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 MED24O75448 989 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 CBX6O95503 412 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 NR3C1P04150 777 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 HIBADHP31937 336 aaKnown RBP14.99□□□□□ -0.01
VPS52-212ENST00000445902 SOX5P35711 763 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 VPS41P49754 854 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 ERFEQ4G0M1 354 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 BTBD6Q96KE9 485 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 TMEM109Q9BVC6 243 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 DNAJC12Q9UKB3 198 aa14.99□□□□□ -0.01
VPS52-212ENST00000445902 SFI1A8K8P3 1242 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 CETPP11597 493 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 LMNB1P20700 586 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 ATP6V1C1P21283 382 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 TNFAIP3P21580 790 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 PEX5P50542 639 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 CALCOCO2Q13137 446 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 MUM1Q2TAK8 710 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 BICDL1Q6ZP65 573 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 CROCCP2Q86T23 111 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 LRRC47Q8N1G4 583 aaKnown RBP14.98□□□□□ -0.01
VPS52-212ENST00000445902 CCDC24Q8N4L8 307 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 PHC3Q8NDX5 983 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 ART4Q93070 314 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 PPP1R12CQ9BZL4 782 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.98□□□□□ -0.012e-6■■■■■ 142.8
VPS52-212ENST00000445902 TXLNGQ9NUQ3 528 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 PARP2Q9UGN5 583 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 PODXLO00592 558 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
VPS52-212ENST00000445902 PYGMP11217 842 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 DNAJC3Q13217 504 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 GRIK5Q16478 980 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 FBXO33Q7Z6M2 555 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 SLC51AQ86UW1 340 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 SLC20A1Q8WUM9 679 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 REEP2Q9BRK0 252 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 TAOK3Q9H2K8 898 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 AAASQ9NRG9 546 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 SYNGAP1Q96PV0 1343 aa14.98□□□□□ -0.01
VPS52-212ENST00000445902 SPAG7O75391 227 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 RBM26Q5T8P6 1007 aaKnown RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 ZC3H3Q8IXZ2 948 aaKnown RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 C1orf54Q8WWF1 131 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 DNAJC9Q8WXX5 260 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 NT5C3AQ9H0P0 336 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 SLCO1B3Q9NPD5 702 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 PCYOX1Q9UHG3 505 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 CHKBQ9Y259 395 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 DIS3Q9Y2L1 958 aaKnown RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 PHLPP1O60346 1717 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 WFS1O76024 890 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 GCNT3O95395 438 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 SP100P23497 879 aaPredicted RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 COILP38432 576 aaPredicted RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 MRPS35P82673 323 aaKnown RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 KLC1Q07866 573 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 MTFR1Q15390 333 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 PPP4R3CPQ6ZMV5 832 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 TBC1D10AQ9BXI6 508 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 ASIC3Q9UHC3 531 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 ASTN1O14525 1302 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 PASKQ96RG2 1323 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 PITPNM2Q9BZ72 1349 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 TAC1P20366 129 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 COMTP21964 271 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 ROR2Q01974 943 aaKnown RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 ORC2Q13416 577 aaPredicted RBP14.97□□□□□ -0.01
VPS52-212ENST00000445902 SETDB1Q15047 1291 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 SEL1L2Q5TEA6 688 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 RNF43Q68DV7 783 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 MFN1Q8IWA4 741 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 UBL4BQ8N7F7 174 aa14.97□□□□□ -0.01
VPS52-212ENST00000445902 RUNDC3BQ96NL0 473 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms