RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 AGPAT3Q9NRZ7 376 aa23.13■■□□□ 1.29
VPS13B-204ENST00000441350 SAMSN1Q9NSI8 373 aaKnown RBP23.13■■□□□ 1.29
VPS13B-204ENST00000441350 CGNQ9P2M7 1197 aaKnown RBP23.13■■□□□ 1.29
VPS13B-204ENST00000441350 KIAA0100Q14667 2235 aaKnown RBP23.13■■□□□ 1.29
VPS13B-204ENST00000441350 EDN1P05305 212 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 IQCF3P0C7M6 154 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 ZNF18P17022 549 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 MRPS6P82932 125 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 FKBP3Q00688 224 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 TPD52L1Q16890 204 aaPredicted RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 FAM187BQ17R55 369 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 TRIM71Q2Q1W2 868 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 CDKAL1Q5VV42 579 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 SLC39A4Q6P5W5 647 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 NOC3LQ8WTT2 800 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 TMEM174Q8WUU8 243 aa23.12■■□□□ 1.29
VPS13B-204ENST00000441350 DHX38Q92620 1227 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 SRRTQ9BXP5 876 aaKnown RBP23.12■■□□□ 1.29
VPS13B-204ENST00000441350 ANKRD63C9JTQ0 380 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 INO80B-WBP1J3KQ70 363 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 PRKCBP05771 671 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 IRF2BP1Q8IU81 584 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 C12orf56Q8IXR9 622 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 SCLT1Q96NL6 688 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 GCOM2Q9BZD3 368 aaPredicted RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 INO80BQ9C086 356 aaPredicted RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 THAP9Q9H5L6 903 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 NOD1Q9Y239 953 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 TISP43B9A030 160 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 ACKR2O00590 384 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 NR3C1P04150 777 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 CRYBB1P53674 252 aaPredicted RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 FAM126BQ8IXS8 530 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 DIS3LQ8TF46 1054 aaKnown RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 OSMRQ99650 979 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 CELF4Q9BZC1 486 aaKnown RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 PRMT7Q9NVM4 692 aaPredicted RBP23.11■■□□□ 1.29
VPS13B-204ENST00000441350 DMAC2Q9NW81 257 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 USP20Q9Y2K6 914 aa23.11■■□□□ 1.29
VPS13B-204ENST00000441350 TTLL13PA6NNM8 815 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 HNRNPDLO14979 420 aaKnown RBP23.1■■□□□ 1.29
VPS13B-204ENST00000441350 CLIC2O15247 247 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 CSDE1O75534 798 aaKnown RBP23.1■■□□□ 1.29
VPS13B-204ENST00000441350 DARSP14868 501 aaKnown RBP23.1■■□□□ 1.29
VPS13B-204ENST00000441350 NR2F2P24468 414 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 TPM4P67936 248 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 MYBPC2Q14324 1141 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 AMHR2Q16671 573 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 ZPBP2Q6X784 338 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 SLC39A5Q6ZMH5 540 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 SLC9A9Q8IVB4 645 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 EEF2KMTQ96G04 330 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 CEP63Q96MT8 703 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 TARS2Q9BW92 718 aaKnown RBP23.1■■□□□ 1.29
VPS13B-204ENST00000441350 MRPL4Q9BYD3 311 aaKnown RBP23.1■■□□□ 1.29
VPS13B-204ENST00000441350 GINS2Q9Y248 185 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 STYXL1Q9Y6J8 313 aa23.1■■□□□ 1.29
VPS13B-204ENST00000441350 FGFR1OPO95684 399 aaKnown RBP23.09■■□□□ 1.29
VPS13B-204ENST00000441350 CD4P01730 458 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 EIF4BP23588 611 aaKnown RBP23.09■■□□□ 1.29
VPS13B-204ENST00000441350 RPL13P26373 211 aaKnown RBP23.09■■□□□ 1.29
VPS13B-204ENST00000441350 ADSSP30520 456 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 MRE11P49959 708 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 MGAT3Q09327 533 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 ADAM9Q13443 819 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 SNX17Q15036 470 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 C1orf53Q5VUE5 145 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 BICD1Q96G01 975 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 TRPV2Q9Y5S1 764 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 CDY2AQ9Y6F7 541 aa23.09■■□□□ 1.29
VPS13B-204ENST00000441350 CAND2O75155 1236 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 CHRNA1P02708 482 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 ATP1A3P13637 1013 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 THPOP40225 353 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 LIG4P49917 911 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 PCBP1Q15365 356 aaKnown RBP eCLIP23.08■■□□□ 1.29
VPS13B-204ENST00000441350 HSP90AA4PQ58FG1 418 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 TMEM40Q8WWA1 233 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 ACO2Q99798 780 aaKnown RBP23.08■■□□□ 1.29
VPS13B-204ENST00000441350 CBWD1Q9BRT8 395 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 MROH7Q68CQ1 1323 aa23.08■■□□□ 1.29
VPS13B-204ENST00000441350 M0QZ92 97 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 CETN3O15182 167 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 PRPF4BQ13523 1007 aaKnown RBP23.08■■□□□ 1.28
VPS13B-204ENST00000441350 FAM26DQ5JW98 314 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 TSHZ1Q6ZSZ6 1077 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 ANKRD33Q7Z3H0 272 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.28
VPS13B-204ENST00000441350 CNTNAP2Q9UHC6 1331 aa23.07■■□□□ 1.28
VPS13B-204ENST00000441350 B4GALT5O43286 388 aa23.07■■□□□ 1.28
VPS13B-204ENST00000441350 GARTP22102 1010 aa23.07■■□□□ 1.28
VPS13B-204ENST00000441350 ATN1P54259 1190 aaPredicted RBP23.07■■□□□ 1.28
VPS13B-204ENST00000441350 PAWRQ96IZ0 340 aaKnown RBP23.07■■□□□ 1.28
VPS13B-204ENST00000441350 PTPRHQ9HD43 1115 aa23.07■■□□□ 1.28
VPS13B-204ENST00000441350 TSPAN1O60635 241 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 TOM1L1O75674 476 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 CTSHP09668 335 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 RBL2Q08999 1139 aa23.06■■□□□ 1.28
VPS13B-204ENST00000441350 SLFN12LQ6IEE8 588 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms