RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 H0YCG3 227 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 K7ERI5 159 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ACKR2O00590 384 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ARHGEF15O94989 841 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 PRKCBP05771 671 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ARF4P18085 180 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-206ENST00000439717 IBSPP21815 317 aaPredicted RBP13.03□□□□□ -0.32
HSPG2-206ENST00000439717 SCP2P22307 547 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ZNF131P52739 623 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ERVK-21P61565 698 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 RAD51AP2Q09MP3 1159 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
HSPG2-206ENST00000439717 GIT2Q14161 759 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 GRIN2CQ14957 1233 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 E2F4Q16254 413 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 UBXN11Q5T124 520 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 RESP18Q5W5W9 173 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ADALQ6DHV7 355 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 MRPL10Q7Z7H8 261 aaKnown RBP13.03□□□□□ -0.32
HSPG2-206ENST00000439717 IQUBQ8NA54 791 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 KCNN1Q92952 543 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 GUCD1Q96NT3 240 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 REEP2Q9BRK0 252 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 PANK2Q9BZ23 570 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 LRRC27Q9C0I9 530 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 PARVGQ9HBI0 331 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 ARHGAP28Q9P2N2 729 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 PCDHB2Q9Y5E7 798 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 CHD9Q3L8U1 2897 aa13.03□□□□□ -0.32
HSPG2-206ENST00000439717 SFI1A8K8P3 1242 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 N4BP3O15049 544 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 B4GALT5O43286 388 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 TBCAO75347 108 aaKnown RBP13.02□□□□□ -0.33
HSPG2-206ENST00000439717 FAM13AO94988 1023 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 ATF7P17544 494 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-206ENST00000439717 CMA1P23946 247 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 SLC27A1Q6PCB7 646 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 HACE1Q8IYU2 909 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 ABI1Q8IZP0 508 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 PDILTQ8N807 584 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 RNF169Q8NCN4 708 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 SLC17A8Q8NDX2 589 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 CLP1Q92989 425 aaKnown RBP13.02□□□□□ -0.33
HSPG2-206ENST00000439717 CPB2Q96IY4 423 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 CDX2Q99626 313 aaPredicted RBP13.02□□□□□ -0.33
HSPG2-206ENST00000439717 KIFC3Q9BVG8 833 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 TNMDQ9H2S6 317 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 MAGEF1Q9HAY2 307 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 UBN1Q9NPG3 1134 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 RNF19AQ9NV58 838 aa13.02□□□□□ -0.33
HSPG2-206ENST00000439717 MYMKA6NI61 221 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 TBKBP1A7MCY6 615 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 SLC16A4O15374 487 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 RB1P06400 928 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 FGFR1P11362 822 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 ABCD1P33897 745 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 GATMP50440 423 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 NCKAP1LP55160 1127 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 AMPD3Q01432 767 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 CACNB1Q02641 598 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-206ENST00000439717 MYCT1Q8N699 235 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 TMEM161BQ8NDZ6 487 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 ARNTL2Q8WYA1 636 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 DDX12PQ92771 950 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 CHAMP1Q96JM3 812 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 CASD1Q96PB1 797 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 TRIM6Q9C030 488 aaPredicted RBP13.01□□□□□ -0.33
HSPG2-206ENST00000439717 KBTBD4Q9NVX7 518 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 SEL1LQ9UBV2 794 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 KCNH3Q9ULD8 1083 aa13.01□□□□□ -0.33
HSPG2-206ENST00000439717 A0A1W2PQ27 194 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 A0A1W2PQ64 194 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 A0A1W2PQD8 194 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 C5orf67F2Z3F1 127 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 POLR2DO15514 142 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 TRAK2O60296 914 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 LINC00271P0C7V0 271 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 MAPTP10636 758 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 GAP43P17677 238 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 LIG1P18858 919 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 BMPR1AP36894 532 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 STRN3Q13033 797 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 PAN2Q504Q3 1202 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 EPC2Q52LR7 807 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 CLLU1OSQ5K130 101 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 NT5DC1Q5TFE4 455 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 ATF7IP2Q5U623 682 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 GLB1LQ6UWU2 654 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 APBB1IPQ7Z5R6 666 aaPredicted RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 TMEM192Q8IY95 271 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 SMG8Q8ND04 991 aaKnown RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 FBXO22Q8NEZ5 403 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 DHX58Q96C10 678 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 DNAJC19Q96DA6 116 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 GAS2L1Q99501 681 aaPredicted RBP13□□□□□ -0.33
HSPG2-206ENST00000439717 ADPGKQ9BRR6 497 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 C17orf80Q9BSJ5 609 aa13□□□□□ -0.33
HSPG2-206ENST00000439717 PLVAPQ9BX97 442 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms