RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 TSNAXIP1Q2TAA8 658 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 HERC4Q5GLZ8 1057 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 BTBD6Q96KE9 485 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 GANQ9H2C0 597 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 CDC42EP4Q9H3Q1 356 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 DCTN4Q9UJW0 460 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 USP21Q9UK80 565 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 EP400Q96L91 3159 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 ATMINO43313 823 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 USP17L8P0C7I0 530 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 COASYQ13057 564 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 ITPK1Q13572 414 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 LRRC36Q1X8D7 754 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 CCDC137Q6PK04 289 aaKnown RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 PTF1AQ7RTS3 328 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 LRRC8CQ8TDW0 803 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 HES6Q96HZ4 224 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 CDCA7Q9BWT1 371 aaPredicted RBP12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 THAP2Q9H0W7 228 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 GALNT8Q9NY28 637 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 AIPL1Q9NZN9 384 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 BRWD3Q6RI45 1802 aa12.12□□□□□ -0.47
SEC61A1-202ENST00000424880 SMCO2A6NFE2 343 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CETN3O15182 167 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CLIC2O15247 247 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 T-ENOLP0DO92 83 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CALM1P0DP23 149 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CALM2P0DP24 149 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CALM3P0DP25 149 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 NR2F2P24468 414 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 RCAN1P53805 252 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 INHBCP55103 352 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 OVGP1Q12889 678 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 DYNC1I2Q13409 638 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 GBP7Q8N8V2 638 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 SEC14L1Q92503 715 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 C12orf65Q9H3J6 166 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 PCNTO95613 3336 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 MYH3P11055 1940 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CAPN9O14815 690 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CYP1A1P04798 512 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 MYL1P05976 194 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 LRRC63Q05C16 580 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 PPP2R5BQ15173 497 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 FAM98CQ17RN3 349 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 TAF1BQ53T94 588 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 ZNF746Q6NUN9 644 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 RASGEF1CQ8N431 466 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 SLC7A6OSQ96CW6 309 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 DNAJC1Q96KC8 554 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 RAB3IPQ96QF0 476 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 ALG13Q9NP73 1137 aaKnown RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 PRKAG3Q9UGI9 489 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 COG5Q9UP83 839 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 STXBP5LQ9Y2K9 1186 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 WASF2Q9Y6W5 498 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 E7ENQ6 273 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 LRRN2O75325 713 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CCNB1P14635 433 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 CASP4P49662 377 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 MTM1Q13496 603 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 COL23A1Q86Y22 540 aaPredicted RBP12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 PRELID2Q8N945 189 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 C1orf54Q8WWF1 131 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 GBP5Q96PP8 586 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 VCXQ9H320 206 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 IL17RBQ9NRM6 502 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 HDAC9Q9UKV0 1011 aa12.11□□□□□ -0.47
SEC61A1-202ENST00000424880 LOC102724428A0A0B4J2F2 783 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 C2orf71A6NGG8 1288 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 M0R2N6 131 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 FLOT1O75955 427 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 DDAH1O94760 285 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 CHRNB2P17787 502 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 SIK1P57059 783 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 KPNB1Q14974 876 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 SETDB1Q15047 1291 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 FAM26FQ5R3K3 315 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 TRIM59Q8IWR1 403 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 KBTBD2Q8IY47 623 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 RBBP8NLQ8NC74 664 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 FAM136AQ96C01 138 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 C9orf72Q96LT7 481 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 CYTH2Q99418 400 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 RIOK1Q9BRS2 568 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 PLA2G12BQ9BX93 195 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 CCDC134Q9H6E4 229 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 ETNK2Q9NVF9 386 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 SUCLA2Q9P2R7 463 aaPredicted RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 PNPLA7Q6ZV29 1317 aa12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 HNRNPRO43390 633 aaKnown RBP12.1□□□□□ -0.47
SEC61A1-202ENST00000424880 MARCH6O60337 910 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms