RNA–Protein interactions for RNA: ENST00000414675.6

LRCH3-202, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRCH3, Length 2,299 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-202ENST00000414675 TERF2Q15554 542 aa16.69■□□□□ 0.26
LRCH3-202ENST00000414675 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
LRCH3-202ENST00000414675 PRRT2Q7Z6L0 340 aaPredicted RBP16.69■□□□□ 0.26
LRCH3-202ENST00000414675 SLC17A8Q8NDX2 589 aa16.69■□□□□ 0.26
LRCH3-202ENST00000414675 SPATA4Q8NEY3 305 aa16.69■□□□□ 0.26
LRCH3-202ENST00000414675 MAF1Q9H063 256 aa16.69■□□□□ 0.26
LRCH3-202ENST00000414675 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.69■□□□□ 0.262e-7■■■■■ 202.9
LRCH3-202ENST00000414675 EXOC7Q9UPT5 735 aa16.69■□□□□ 0.26
LRCH3-202ENST00000414675 ZMYND10O75800 440 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 CNMDO75829 334 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 NCAPG2Q86XI2 1143 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 KAT5Q92993 513 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 HVCN1Q96D96 273 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 PAGR1Q9BTK6 254 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 POLR3FQ9H1D9 316 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 ATP6V0A4Q9HBG4 840 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 UBE2TQ9NPD8 197 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 L1RE1Q9UN81 338 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 MAP2K7O14733 419 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 ATG7O95352 703 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 H2AFZP0C0S5 128 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 MRPS25P82663 173 aaKnown RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 XKR3Q5GH77 459 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 H2AFVQ71UI9 128 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 VPS36Q86VN1 386 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 PALB2Q86YC2 1186 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 MCPH1Q8NEM0 835 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 POP1Q99575 1024 aaKnown RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 UBXN6Q9BZV1 441 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 C17orf75Q9HAS0 396 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 TOPORSQ9NS56 1045 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 USP20Q9Y2K6 914 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 MAFBQ9Y5Q3 323 aaPredicted RBP16.68■□□□□ 0.26
LRCH3-202ENST00000414675 LRRC37A2A6NM11 1700 aa16.68■□□□□ 0.26
LRCH3-202ENST00000414675 P4HA2O15460 535 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 UBA1P22314 1058 aaKnown RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 IREB2P48200 963 aaKnown RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 MXI1P50539 228 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 MCCD1P59942 119 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 PTPROQ16827 1216 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 C9orf131Q5VYM1 1079 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 MMGT1Q8N4V1 131 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 LRRC57Q8N9N7 239 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 SEMA4DQ92854 862 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 CCDC127Q96BQ5 260 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 CDCA5Q96FF9 252 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 PKNOX2Q96KN3 472 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 HINFPQ9BQA5 517 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 ZNF302Q9NR11 478 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 LRRIQ3A6PVS8 624 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 TMCO5BA8MYB1 307 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 TULP1O00294 542 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 N4BP1O75113 896 aaKnown RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 ERLIN1O75477 346 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 EDNRBP24530 442 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 MATR3P43243 847 aaKnown RBP eCLIP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 NOP2P46087 812 aaKnown RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 GALCP54803 685 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 MAP2K1Q02750 393 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 ITIH3Q06033 890 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 KIF22Q14807 665 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 EMC2Q15006 297 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 PROCA1Q8NCQ7 364 aaPredicted RBP16.67■□□□□ 0.26
LRCH3-202ENST00000414675 HDAC7Q8WUI4 952 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 SLC20A1Q8WUM9 679 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 FAM84AQ96KN4 292 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 PCYT2Q99447 389 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 TAS2R14Q9NYV8 317 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 FBXO40Q9UH90 709 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 TSKSQ9UJT2 592 aa16.67■□□□□ 0.26
LRCH3-202ENST00000414675 GSTTP1A0A1W2PQM5 241 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 TARSL2A2RTX5 802 aaKnown RBP16.66■□□□□ 0.26
LRCH3-202ENST00000414675 RTP1P59025 263 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 IRX3P78415 501 aaPredicted RBP16.66■□□□□ 0.26
LRCH3-202ENST00000414675 PPATQ06203 517 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 TPCN2Q8NHX9 752 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 PARD3BQ8TEW8 1205 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 TMEM143Q96AN5 459 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 ZBTB9Q96C00 473 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 FBXL18Q96ME1 805 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 LRRC1Q9BTT6 524 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 TXNRD2Q9NNW7 524 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 ARHGAP28Q9P2N2 729 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 ATP8B3O60423 1300 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 FARP2O94887 1054 aaPredicted RBP16.66■□□□□ 0.26
LRCH3-202ENST00000414675 OATP04181 439 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 TUBBP07437 444 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 MYBL2P10244 700 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 RFX1P22670 979 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 CCDC181Q5TID7 509 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 EEPD1Q7L9B9 569 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 ERO1BQ86YB8 467 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 POMGNT1Q8WZA1 660 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 CEP89Q96ST8 783 aa16.66■□□□□ 0.26
LRCH3-202ENST00000414675 RBM12Q9NTZ6 932 aaKnown RBP16.66■□□□□ 0.26
LRCH3-202ENST00000414675 MCM3APO60318 1980 aa16.65■□□□□ 0.26
LRCH3-202ENST00000414675 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
LRCH3-202ENST00000414675 SPDYE5A6NIY4 337 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms