RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
PKP4-203ENST00000411900 DNAJB4Q9UDY4 337 aa11.18□□□□□ -0.62
PKP4-203ENST00000411900 ASAP2O43150 1006 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 B4GALT3O60512 393 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 TSPAN1O60635 241 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 DGAT1O75907 488 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 POMCP01189 267 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 ARL2P36404 184 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 PTENP60484 403 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 TFDP1Q14186 410 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 MXD4Q14582 209 aaPredicted RBP11.17□□□□□ -0.62
PKP4-203ENST00000411900 RABEP1Q15276 862 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 SMAD2Q15796 467 aaKnown RBP11.17□□□□□ -0.62
PKP4-203ENST00000411900 ZNF280BQ86YH2 543 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 NOSTRINQ8IVI9 506 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 ADHFE1Q8IWW8 467 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 BCL7CQ8WUZ0 217 aaPredicted RBP11.17□□□□□ -0.62
PKP4-203ENST00000411900 PGBD4Q96DM1 585 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 TMEM169Q96HH4 297 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 C1QTNF1Q9BXJ1 281 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 RSAD1Q9HA92 442 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 POLD4Q9HCU8 107 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 TUFT1Q9NNX1 390 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 NOL7Q9UMY1 257 aaKnown RBP11.17□□□□□ -0.62
PKP4-203ENST00000411900 LZTS1Q9Y250 596 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 HES2Q9Y543 173 aa11.17□□□□□ -0.62
PKP4-203ENST00000411900 LRRIQ4A6NIV6 560 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 PI4K2BG5E9Z4 385 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 B4GALT5O43286 388 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 ZNF623O75123 536 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 DDHD2O94830 711 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 CD2BP2O95400 341 aaKnown RBP11.16□□□□□ -0.62
PKP4-203ENST00000411900 GALTP07902 379 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 SLC11A1P49279 550 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 MBTD1Q05BQ5 628 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 COASYQ13057 564 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 SMC1AQ14683 1233 aaKnown RBP11.16□□□□□ -0.62
PKP4-203ENST00000411900 ECM1Q16610 540 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 TMEM31Q5JXX7 168 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 MCTP1Q6DN14 999 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 PDE12Q6L8Q7 609 aaKnown RBP11.16□□□□□ -0.62
PKP4-203ENST00000411900 VPS52Q8N1B4 723 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 SMRP1Q8NCR6 262 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 SMG8Q8ND04 991 aaKnown RBP11.16□□□□□ -0.62
PKP4-203ENST00000411900 URGCPQ8TCY9 931 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 LRFN3Q9BTN0 628 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 RNF39Q9H2S5 420 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 C11orf16Q9NQ32 467 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 PRKAG3Q9UGI9 489 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 USP15Q9Y4E8 981 aaPredicted RBP11.16□□□□□ -0.62
PKP4-203ENST00000411900 IPPQ9Y573 584 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 PCDHB6Q9Y5E3 794 aa11.16□□□□□ -0.62
PKP4-203ENST00000411900 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 ARHGEF35A5YM69 484 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 C2orf71A6NGG8 1288 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 C19orf67A6NJJ6 358 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 ST18O60284 1047 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 EYA4O95677 639 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 CXCL14O95715 111 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 SSBP05455 408 aaKnown RBP eCLIP11.15□□□□□ -0.62
PKP4-203ENST00000411900 ITGA4P13612 1032 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 ARF4P18085 180 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 LIG1P18858 919 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 NCLP19338 710 aaKnown RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 SP100P23497 879 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 CCT6AP40227 531 aaKnown RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 MLH1P40692 756 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 TOB1P50616 345 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 AMHR2Q16671 573 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 NOTUMQ6P988 496 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 MRPL10Q7Z7H8 261 aaKnown RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 C4orf32Q8N8J7 132 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 ERMNQ8TAM6 284 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 BSNDQ8WZ55 320 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 IGSF21Q96ID5 467 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 TMX3Q96JJ7 454 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 FAM193BQ96PV7 902 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 NACC1Q96RE7 527 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 GAD1Q99259 594 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 CDCA3Q99618 268 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 POLR3CQ9BUI4 534 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 TRIM6Q9C030 488 aaPredicted RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 NGRNQ9NPE2 291 aaKnown RBP11.15□□□□□ -0.62
PKP4-203ENST00000411900 MUTYHQ9UIF7 546 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 CDH22Q9UJ99 828 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 USP20Q9Y2K6 914 aa11.15□□□□□ -0.62
PKP4-203ENST00000411900 PP2D1A8MPX8 630 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 CLASP2O75122 1294 aaKnown RBP11.14□□□□□ -0.63
PKP4-203ENST00000411900 NPTXRO95502 500 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 XRCC6P12956 609 aaKnown RBP eCLIP11.14□□□□□ -0.63
PKP4-203ENST00000411900 AKAP5P24588 427 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 U2AF2P26368 475 aaKnown RBP eCLIP11.14□□□□□ -0.633e-7■■■■□ 21.4
PKP4-203ENST00000411900 RPA1P27694 616 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 AXLP30530 894 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 NCBP1Q09161 790 aaKnown RBP11.14□□□□□ -0.63
PKP4-203ENST00000411900 PTGDRQ13258 359 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 KCNC3Q14003 757 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 ANKRD54Q6NXT1 300 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 PADI6Q6TGC4 694 aa11.14□□□□□ -0.63
PKP4-203ENST00000411900 MRPL43Q8N983 215 aaKnown RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms