RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ALDH5A1P51649 535 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF445P59923 1031 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 KRT76Q01546 638 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 CRHR2Q13324 411 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 PDCD2Q16342 344 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 SBK1Q52WX2 424 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 TREML2Q5T2D2 321 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 COL13A1Q5TAT6 717 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 IQSEC1Q6DN90 963 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 GPAT2Q6NUI2 795 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 KIAA1211LQ6NV74 962 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 FAM180BQ6P0A1 224 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 BRAPQ7Z569 592 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 PRRT2Q7Z6L0 340 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 GAS2L3Q86XJ1 694 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 TBC1D10CQ8IV04 446 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 GPR161Q8N6U8 529 aaKnown RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 NAXEQ8NCW5 288 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 GIMAP8Q8ND71 665 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 ZNF280CQ8ND82 737 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 OR2W6PQ8NHA6 318 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 TRIM63Q969Q1 353 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 HSH2DQ96JZ2 352 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 SUSD3Q96L08 255 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 PPM1MQ96MI6 270 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 AIFM3Q96NN9 605 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 TCF12Q99081 682 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 AARSD1Q9BTE6 412 aaKnown RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 CRB3Q9BUF7 120 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 MENTQ9BUN1 341 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 NIFKQ9BYG3 293 aaKnown RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 NACAP1Q9BZK3 213 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 POLMQ9NP87 494 aaPredicted RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 TRMT13Q9NUP7 481 aaKnown RBP5.1□□□□□ -1.59
SF3B1-202ENST00000409915 FNIP2Q9P278 1114 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 NDOR1Q9UHB4 597 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 PAXBP1Q9Y5B6 917 aa5.1□□□□□ -1.59
SF3B1-202ENST00000409915 PTPRFP10586 1907 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 A0A1W2PQU0 124 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 A0A1W2PRG0 241 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 HIP1O00291 1037 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 PDHXO00330 501 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SGSM2O43147 1006 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 NMT2O60551 498 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 PEX10O60683 326 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 ATE1O95260 518 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 LTFP02788 710 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 JMJD7P0C870 316 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 FAM200BP0CF97 657 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 NCAM1P13591 858 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CHKAP35790 457 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SUMO1P63165 101 aaKnown RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CAP1Q01518 475 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CENPCQ03188 943 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 PTH1RQ03431 593 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 ICA1Q05084 483 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 PCBP2Q15366 365 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SV2CQ496J9 727 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 ZC3H12AQ5D1E8 599 aaKnown RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 TRIM61Q5EBN2 209 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 BMP2KLQ5H9B9 411 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 FAM47AQ5JRC9 791 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 RRP12Q5JTH9 1297 aaKnown RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 KIAA1755Q5JYT7 1200 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 RASGRP2Q7LDG7 609 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 FGD2Q7Z6J4 655 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CATIPQ7Z7H3 387 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SLC41A1Q8IVJ1 513 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SCUBE1Q8IWY4 988 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SLC7A14Q8TBB6 771 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 HSPBAP1Q96EW2 488 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 TACO1Q9BSH4 297 aaKnown RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 MKNK2Q9HBH9 465 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 KIAA1586Q9HCI6 787 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CABP5Q9NP86 173 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 KMT5AQ9NQR1 393 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 RASSF1Q9NS23 344 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 TOMM22Q9NS69 142 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 C1orf112Q9NSG2 853 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 SPTLC3Q9NUV7 552 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 RRN3Q9NYV6 651 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CCDC39Q9UFE4 941 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 GPN3Q9UHW5 284 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CPA4Q9UI42 421 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 CTNNA3Q9UI47 895 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 POLR3KQ9Y2Y1 108 aaPredicted RBP5.09□□□□□ -1.59
SF3B1-202ENST00000409915 TAF6LQ9Y6J9 622 aa5.09□□□□□ -1.59
SF3B1-202ENST00000409915 ZSWIM8A7E2V4 1837 aa5.09□□□□□ -1.6
SF3B1-202ENST00000409915 LOC285556D6RIA3 1793 aa5.09□□□□□ -1.6
SF3B1-202ENST00000409915 ZMYM6O95789 1325 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 ADGRA2Q96PE1 1338 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 MYH8P13535 1937 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 GREB1LQ9C091 1923 aaPredicted RBP5.08□□□□□ -1.6
SF3B1-202ENST00000409915 CCDC196A0A1B0GTZ2 297 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 hCG_1642624A0A1W2PR95 340 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 MEIS3P2A8K0S8 358 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 K7ENM7 598 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 GPR25O00155 361 aa5.08□□□□□ -1.6
SF3B1-202ENST00000409915 CXCL11O14625 94 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms