RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 ST13P5Q8NFI4 369 aaPredicted RBP18.76■□□□□ 0.59
CHMP3-203ENST00000409225 NXPE3Q969Y0 559 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 NLRP4Q96MN2 994 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 FOXQ1Q9C009 403 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 UNC45AQ9H3U1 944 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 C6orf50Q9HD87 102 aa18.76■□□□□ 0.59
CHMP3-203ENST00000409225 FAM217BQ9NTX9 383 aaPredicted RBP18.76■□□□□ 0.59
CHMP3-203ENST00000409225 SUCLA2Q9P2R7 463 aaPredicted RBP18.76■□□□□ 0.59
CHMP3-203ENST00000409225 MSH4O15457 936 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 GAS7O60861 476 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 GLUD1P00367 558 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 POMCP01189 267 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 SPATA31D3P0C874 917 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 GLULP15104 373 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 CIITAP33076 1130 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 JAK3P52333 1124 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 NECTIN1Q15223 517 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 DCLRE1AQ6PJP8 1040 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 CYP26C1Q6V0L0 522 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 SPATA31D4Q6ZUB0 917 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 KSR1Q8IVT5 923 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 GJA10Q969M2 543 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 RPS6KC1Q96S38 1066 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 TMEM175Q9BSA9 504 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 HERC2P3Q9BVR0 1158 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 ZMYND12Q9H0C1 365 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 RSAD1Q9HA92 442 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 PIDD1Q9HB75 910 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 DPP7Q9UHL4 492 aa18.75■□□□□ 0.59
CHMP3-203ENST00000409225 NAP1L2Q9ULW6 460 aaPredicted RBP18.75■□□□□ 0.59
CHMP3-203ENST00000409225 PRG3Q9Y2Y8 225 aaPredicted RBP18.75■□□□□ 0.59
CHMP3-203ENST00000409225 KLF18A0A0U1RQI7 1052 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 ESYT2A0FGR8 921 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 KINO60870 393 aaKnown RBP18.74■□□□□ 0.59
CHMP3-203ENST00000409225 LRRN2O75325 713 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 SFNP31947 248 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 GET4Q7L5D6 327 aaPredicted RBP18.74■□□□□ 0.59
CHMP3-203ENST00000409225 SUMF1Q8NBK3 374 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 PJA1Q8NG27 643 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 ZNF707Q96C28 371 aaPredicted RBP18.74■□□□□ 0.59
CHMP3-203ENST00000409225 CEP89Q96ST8 783 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 TEKT3Q9BXF9 490 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 NIFKQ9BYG3 293 aaKnown RBP18.74■□□□□ 0.59
CHMP3-203ENST00000409225 MARCH5Q9NX47 278 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 SSX2IPQ9Y2D8 614 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 FANCMQ8IYD8 2048 aa18.74■□□□□ 0.59
CHMP3-203ENST00000409225 IGKV6-21A0A0C4DH24 114 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 LAMP2P13473 410 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 HTR4Q13639 388 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 XKR3Q5GH77 459 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 LRCH2Q5VUJ6 765 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 MIER3Q7Z3K6 550 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 CCDC12Q8WUD4 166 aaPredicted RBP18.73■□□□□ 0.59
CHMP3-203ENST00000409225 CCDC136Q96JN2 1154 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 RIT2Q99578 217 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 RHOBTB2Q9BYZ6 727 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 KANSL3Q9P2N6 904 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 NUMBLQ9Y6R0 609 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 DOCK8Q8NF50 2099 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 EPG5Q9HCE0 2579 aa18.73■□□□□ 0.59
CHMP3-203ENST00000409225 ADD1P35611 737 aaKnown RBP18.72■□□□□ 0.59
CHMP3-203ENST00000409225 OR1G1P47890 313 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 GLUD2P49448 558 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 EXOSC10Q01780 885 aaKnown RBP18.72■□□□□ 0.59
CHMP3-203ENST00000409225 MRPL10Q7Z7H8 261 aaKnown RBP18.72■□□□□ 0.59
CHMP3-203ENST00000409225 PALB2Q86YC2 1186 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 MAML2Q8IZL2 1156 aaPredicted RBP18.72■□□□□ 0.59
CHMP3-203ENST00000409225 SLC5A5Q92911 643 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 ANO2Q9NQ90 1003 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 SLC2A4RGQ9NR83 387 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 AGPAT5Q9NUQ2 364 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.72■□□□□ 0.59
CHMP3-203ENST00000409225 NCDNQ9UBB6 729 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 CNTNAP2Q9UHC6 1331 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 CACNA1IQ9P0X4 2223 aa18.72■□□□□ 0.59
CHMP3-203ENST00000409225 GPR179Q6PRD1 2367 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 DDX11L8A8MPP1 907 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 ANHXE9PGG2 379 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 MAFO75444 373 aaPredicted RBP18.71■□□□□ 0.59
CHMP3-203ENST00000409225 STBD1O95210 358 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 GNA11P29992 359 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 KIAA0319Q5VV43 1072 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 GLYCTKQ8IVS8 523 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 PHKBQ93100 1093 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 ESYT1Q9BSJ8 1104 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 NT5C3AQ9H0P0 336 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 RXFP1Q9HBX9 757 aa18.71■□□□□ 0.59
CHMP3-203ENST00000409225 TPRP12270 2363 aaKnown RBP18.71■□□□□ 0.59
CHMP3-203ENST00000409225 EDIL3O43854 480 aa18.7■□□□□ 0.58
CHMP3-203ENST00000409225 VARS2Q5ST30 1063 aaKnown RBP18.7■□□□□ 0.58
CHMP3-203ENST00000409225 UBXN11Q5T124 520 aa18.7■□□□□ 0.58
CHMP3-203ENST00000409225 DHX32Q7L7V1 743 aaKnown RBP18.7■□□□□ 0.58
CHMP3-203ENST00000409225 COLGALT2Q8IYK4 626 aa18.7■□□□□ 0.58
CHMP3-203ENST00000409225 HDAC7Q8WUI4 952 aa18.7■□□□□ 0.58
CHMP3-203ENST00000409225 IFT122Q9HBG6 1241 aa18.7■□□□□ 0.58
CHMP3-203ENST00000409225 SPATA6Q9NWH7 488 aaPredicted RBP18.7■□□□□ 0.58
CHMP3-203ENST00000409225 F8W810 466 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 TGM5O43548 720 aa18.69■□□□□ 0.58
CHMP3-203ENST00000409225 GAS2O43903 313 aaKnown RBP18.69■□□□□ 0.58
CHMP3-203ENST00000409225 STARD6P59095 220 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms