RNA–Protein interactions for RNA: ENST00000400060.8

PTPRM-203, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5 BASIC

Gene PTPRM, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-203ENST00000400060 AGPSO00116 658 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 KRT16P08779 473 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ALOX5P09917 674 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ABCB4P21439 1286 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 CDK7P50613 346 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TUBA1BP68363 451 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MRPS15P82914 257 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MTFR1Q15390 333 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 HERC4Q5GLZ8 1057 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 C6orf89Q6UWU4 347 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TUBA1AQ71U36 451 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 NET1Q7Z628 596 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 SCUBE1Q8IWY4 988 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MRRFQ96E11 262 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 EPSTI1Q96J88 318 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 RSL24D1Q9UHA3 163 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ACTL7BQ9Y614 415 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 IGSF1Q8N6C5 1336 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 DYTNA2CJ06 578 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 LSM1O15116 133 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MBD4O95243 580 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MAP4P27816 1152 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 KRT6CP48668 564 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 SARSP49591 514 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 BNIP1Q12981 228 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 STX3Q13277 289 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ACVR2BQ13705 512 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TRIP10Q15642 601 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 FAM83BQ5T0W9 1011 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 MEI1Q5TIA1 1274 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 BARGINQ6ZT62 677 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 NEK8Q86SG6 692 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 HECW2Q9P2P5 1572 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 METP08581 1390 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 GLI1P08151 1106 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 NUDT17P0C025 328 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TSHZ1Q6ZSZ6 1077 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TSSK1BQ9BXA7 367 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 RTN2O75298 545 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 FAM58BPP0C7Q3 252 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 CLCN2P51788 898 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 RABGAP1LQ5R372 815 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 CCDC137Q6PK04 289 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 C16orf89Q6UX73 402 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 JAMLQ86YT9 394 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 TNIP2Q8NFZ5 429 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 METTL5Q9NRN9 209 aaKnown RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 SYBUQ9NX95 663 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ABCA6Q8N139 1617 aa10.61□□□□□ -0.71
PTPRM-203ENST00000400060 ABCC3O15438 1527 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 A0A0A6YYK5 440 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 IRS4O14654 1257 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 TIMM10P62072 90 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 GSTO1P78417 241 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 SLC45A4Q5BKX6 768 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 LRRC8BQ6P9F7 803 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 AAGABQ6PD74 315 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 PDZD8Q8NEN9 1154 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 NAT14Q8WUY8 206 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 OSBPL7Q9BZF2 842 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 BLOC1S6Q9UL45 172 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 UMODL1Q5DID0 1318 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 DNM1LO00429 736 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 KRT37O76014 449 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 KRT38O76015 456 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 TJP3O95049 919 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 TMEM63BQ5T3F8 832 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 KAZNQ674X7 775 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 TMPRSS6Q8IU80 811 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 LARP4BQ92615 738 aaKnown RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ANKS1AQ92625 1134 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ASCC2Q9H1I8 757 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 PCDH18Q9HCL0 1135 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ADAMTS1Q9UHI8 967 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 TRPC5Q9UL62 973 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 PCDHA4Q9UN74 947 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 GDAQ9Y2T3 454 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 EME2A4GXA9 379 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 XPO1O14980 1071 aaKnown RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 RHOBTB3O94955 611 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ZNF12P17014 697 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 CDC25AP30304 524 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 C21orf59P57076 290 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 KCNJ2P63252 427 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ADAT2Q7Z6V5 191 aaKnown RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 GUF1Q8N442 669 aaKnown RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 PRCCQ92733 491 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 MYL10Q9BUA6 226 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 HACD3Q9P035 362 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 ZMYND8Q9ULU4 1186 aaPredicted RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 IDO1P14902 403 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 LTKP29376 864 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 GJC1P36383 396 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 NR1H2P55055 460 aa10.6□□□□□ -0.71
PTPRM-203ENST00000400060 NLRP11P59045 1033 aaKnown RBP10.6□□□□□ -0.71
PTPRM-203ENST00000400060 DEFA1P59665 94 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms