RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 PBKQ96KB5 322 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 DDX47Q9H0S4 455 aaKnown RBP25.72■■□□□ 1.71
PABPN1-202ENST00000397276 CNOT7Q9UIV1 285 aaKnown RBP25.72■■□□□ 1.71
PABPN1-202ENST00000397276 NOC2LQ9Y3T9 749 aaKnown RBP25.72■■□□□ 1.71
PABPN1-202ENST00000397276 ANXA13P27216 316 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 NT5DC3Q86UY8 548 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 ACP6Q9NPH0 428 aa25.72■■□□□ 1.71
PABPN1-202ENST00000397276 WDR64B1ANS9 1081 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 ITGA4P13612 1032 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 C1orf220Q5T0J3 134 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 ZNF746Q6NUN9 644 aaPredicted RBP25.71■■□□□ 1.71
PABPN1-202ENST00000397276 POP1Q99575 1024 aaKnown RBP25.71■■□□□ 1.71
PABPN1-202ENST00000397276 ANKRD63C9JTQ0 380 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 PDCLQ13371 301 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 ANO5Q75V66 913 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 CBWD2Q8IUF1 395 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 C4orf19Q8IY42 314 aa25.71■■□□□ 1.71
PABPN1-202ENST00000397276 EIF3HO15372 352 aaKnown RBP eCLIP25.7■■□□□ 1.71
PABPN1-202ENST00000397276 ATP1A2P50993 1020 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 HMGCS2P54868 508 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 ZNF280AP59817 542 aaPredicted RBP25.7■■□□□ 1.71
PABPN1-202ENST00000397276 GTF2BQ00403 316 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 PPARDQ03181 441 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 CETN1Q12798 172 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 PRPF4BQ13523 1007 aaKnown RBP25.7■■□□□ 1.71
PABPN1-202ENST00000397276 NAA35Q5VZE5 725 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 RUFY1Q96T51 708 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 TMEM59LQ9UK28 342 aa25.7■■□□□ 1.71
PABPN1-202ENST00000397276 A0A0A6YYK5 440 aaPredicted RBP25.7■■□□□ 1.7
PABPN1-202ENST00000397276 KRIT1O00522 736 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 MAP2K1Q02750 393 aaPredicted RBP25.7■■□□□ 1.7
PABPN1-202ENST00000397276 SNRNP48Q6IEG0 339 aaKnown RBP25.7■■□□□ 1.7
PABPN1-202ENST00000397276 ADAT2Q7Z6V5 191 aaKnown RBP25.7■■□□□ 1.7
PABPN1-202ENST00000397276 SLFN11Q7Z7L1 901 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 DDX42Q86XP3 938 aaKnown RBP eCLIP25.7■■□□□ 1.75e-9■■■■□ 23
PABPN1-202ENST00000397276 WRNIP1Q96S55 665 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 SYT11Q9BT88 431 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 AMFRQ9UKV5 643 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 INTUQ9ULD6 942 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 STXBP5LQ9Y2K9 1186 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 RGPD3A6NKT7 1758 aaPredicted RBP25.7■■□□□ 1.7
PABPN1-202ENST00000397276 RGPD4Q7Z3J3 1758 aa25.7■■□□□ 1.7
PABPN1-202ENST00000397276 PGRMC1O00264 195 aaKnown RBP25.69■■□□□ 1.7
PABPN1-202ENST00000397276 HSF2BPO75031 334 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 ADRB2P07550 413 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 CCDC172P0C7W6 258 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 HLTFQ14527 1009 aaKnown RBP eCLIP25.69■■□□□ 1.7
PABPN1-202ENST00000397276 MMS22LQ6ZRQ5 1243 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 NLRX1Q86UT6 975 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.69■■□□□ 1.72e-30■■■□□ 18.1
PABPN1-202ENST00000397276 BACE1P56817 501 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 GHRHRQ02643 423 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 PAK2Q13177 524 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 SYCE1Q8N0S2 351 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 ACTRT1Q8TDG2 376 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 RFFLQ8WZ73 363 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 CAVIN3Q969G5 261 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 ZIM3Q96PE6 472 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 AGPAT1Q99943 283 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 GABBR1Q9UBS5 961 aa25.69■■□□□ 1.7
PABPN1-202ENST00000397276 LYPLA2O95372 231 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 KRT14P02533 472 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 NR3C2P08235 984 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 TMEM253P0C7T8 217 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 TNFRSF8P28908 595 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 ADSSP30520 456 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 SCFD2Q8WU76 684 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 TMEM117Q9H0C3 514 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 SART1O43290 800 aaKnown RBP25.68■■□□□ 1.7
PABPN1-202ENST00000397276 ZBTB48P10074 688 aaPredicted RBP25.68■■□□□ 1.7
PABPN1-202ENST00000397276 MAPTP10636 758 aaKnown RBP25.68■■□□□ 1.7
PABPN1-202ENST00000397276 NPTX2P47972 431 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 ALCAMQ13740 583 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 PPM1KQ8N3J5 372 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 SH3GL2Q99962 352 aa25.68■■□□□ 1.7
PABPN1-202ENST00000397276 SUCLA2Q9P2R7 463 aaPredicted RBP25.68■■□□□ 1.7
PABPN1-202ENST00000397276 MXI1P50539 228 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 JAK3P52333 1124 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 MYBPC2Q14324 1141 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 CEP170P1Q96L14 293 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 AMACRQ9UHK6 382 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 COG5Q9UP83 839 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 DENND3A2RUS2 1198 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 ERVK-9P63128 1117 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 KRT76Q01546 638 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 PRKG1Q13976 671 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 FAM84AQ96KN4 292 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 TBX20Q9UMR3 447 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 LOC102724159A0A0B4J2E5 919 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 CES2O00748 559 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 CNGA1P29973 690 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 TGFB2P61812 414 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 KIF22Q14807 665 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 PWP2Q15269 919 aaKnown RBP25.67■■□□□ 1.7
PABPN1-202ENST00000397276 EPC2Q52LR7 807 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 KCNV1Q6PIU1 500 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 RPUSD2Q8IZ73 545 aaKnown RBP25.67■■□□□ 1.7
PABPN1-202ENST00000397276 SLC16A10Q8TF71 515 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 BSNDQ8WZ55 320 aa25.67■■□□□ 1.7
PABPN1-202ENST00000397276 HES6Q96HZ4 224 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms