RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 WTIPA6NIX2 430 aaPredicted RBP5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TISP43B9A030 160 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 B9A039 149 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 H3BML4 177 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 AQP7O14520 342 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 N4BP3O15049 544 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 B3GALT2O43825 422 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TRIM13O60858 407 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TMEM127O75204 238 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 CLEC3AO75596 197 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 CSTBP04080 98 aaKnown RBP5.74□□□□□ -1.49
GABPB1-204ENST00000396464 SDHBP21912 280 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 PSMA3P25788 255 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 CASP5P51878 434 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 MAPK10P53779 464 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 SNX16P57768 344 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 GUCY1A3Q02108 690 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 NBPF9Q3BBW0 867 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 RNF220Q5VTB9 566 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 CREB3L3Q68CJ9 461 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 STYK1Q6J9G0 422 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 USP53Q70EK8 1073 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 ADAT2Q7Z6V5 191 aaKnown RBP5.74□□□□□ -1.49
GABPB1-204ENST00000396464 ESX1Q8N693 406 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TMEM145Q8NBT3 493 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 ARL8AQ96BM9 186 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 CCDC34Q96HJ3 373 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 HHIPL1Q96JK4 782 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 LSM14BQ9BX40 385 aaKnown RBP5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TMEM120AQ9BXJ8 343 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 GBP3Q9H0R5 595 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 NUP62CLQ9H1M0 184 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 NFKBIL1Q9UBC1 381 aaPredicted RBP5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TNFRSF10DQ9UBN6 386 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 GIMAP2Q9UG22 337 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 TMCC3Q9ULS5 477 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 L1RE1Q9UN81 338 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 ZNF281Q9Y2X9 895 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 EMC9Q9Y3B6 208 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 SH3BP1Q9Y3L3 701 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 PCDHGB2Q9Y5G2 931 aa5.74□□□□□ -1.49
GABPB1-204ENST00000396464 A0A0G2JLL6 359 aaPredicted RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 FSD2A1L4K1 749 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 NOTOA8MTQ0 251 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 FRS3O43559 492 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 AHCYL1O43865 530 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 UBXN7O94888 489 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 UBOX5O94941 541 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 PRAMEF1O95521 474 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 APPP05067 770 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 ZBTB48P10074 688 aaPredicted RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 ATP1A3P13637 1013 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CNTFP26441 200 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CACNB3P54284 484 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 EPHB3P54753 998 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 LAPTM5Q13571 262 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 PLCB4Q15147 1175 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 PRSS53Q2L4Q9 553 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 FAM209BQ5JX69 171 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 NBPF12Q5TAG4 269 aaPredicted RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CNKSR3Q6P9H4 555 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CCDC129Q6ZRS4 1044 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 NEK10Q6ZWH5 1172 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 ENOSF1Q7L5Y1 443 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 MTDHQ86UE4 582 aaKnown RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 HEATR4Q86WZ0 1026 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CHST14Q8NCH0 376 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 APPL2Q8NEU8 664 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 PANK1Q8TE04 598 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 TRAPPC12Q8WVT3 735 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 SMARCC1Q92922 1105 aaPredicted RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 SH3KBP1Q96B97 665 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 VWCEQ96DN2 955 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 C1orf159Q96HA4 380 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 FCRL2Q96LA5 508 aaPredicted RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CDADC1Q9BWV3 514 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 XPO4Q9C0E2 1151 aaKnown RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 MKRN2Q9H000 416 aaKnown RBP5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CNTD2Q9H8S5 307 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 GRHPRQ9UBQ7 328 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 FBXL21Q9UKT6 434 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 CORO2BQ9UQ03 480 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 AKT3Q9Y243 479 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 COQ6Q9Y2Z9 468 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 PCDHA8Q9Y5H6 950 aa5.73□□□□□ -1.49
GABPB1-204ENST00000396464 A0A1W2PQ27 194 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 A0A1W2PQ64 194 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 A0A1W2PQC6 194 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 A0A1W2PQD8 194 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 GOLGA8AA7E2F4 631 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 GOLGA8BA8MQT2 603 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 RHPN2P1A8MT19 583 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 C19orf81C9J6K1 198 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 MEIS1O00470 390 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 TGM5O43548 720 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 SIGLEC6O43699 453 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 HMMRO75330 724 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 POLBP06746 335 aa5.72□□□□□ -1.49
GABPB1-204ENST00000396464 PDIA3P30101 505 aaKnown RBP5.72□□□□□ -1.49
GABPB1-204ENST00000396464 LIFRP42702 1097 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms