RNA–Protein interactions for RNA: ENST00000380285.7

SNX1-202, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 8,119 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-202ENST00000380285 DIAPH2O60879 1101 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 PLA2R1Q13018 1463 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KCTD2Q14681 263 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 NR1I3Q14994 352 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 C4orf22Q6V702 233 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 TMEM179Q6ZVK1 233 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KCTD1Q719H9 257 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 RNF139Q8WU17 664 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 WDR24Q96S15 920 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 FRMD8Q9BZ67 464 aaPredicted RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 ATP6V0A4Q9HBG4 840 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 BARHL2Q9NY43 387 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 FAM47DPA6NHR8 397 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 H7C1W4 665 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 PDXKO00764 312 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 VAMP7P51809 220 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 ITIH4Q14624 930 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 GRM4Q14833 912 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 FRA10AC1Q70Z53 315 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 NAF1Q96HR8 494 aaKnown RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 SEC16BQ96JE7 1060 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 C10orf88Q9H8K7 445 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 SLC24A3Q9HC58 644 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KIF17Q9P2E2 1029 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 POTEB3A0JP26 581 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KDM1AO60341 852 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 GUCY1A3Q02108 690 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 POTEBQ6S5H4 581 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 NCLNQ969V3 563 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KLHL8Q9P2G9 620 aaPredicted RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 ZDHHC9Q9Y397 364 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 USP27XA6NNY8 438 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 HMGB3O15347 200 aaKnown RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 PSMD3O43242 534 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 HSPA1AP0DMV8 641 aaKnown RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 HSPA1BP0DMV9 641 aaKnown RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 SRGNP10124 158 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 KCND2Q9NZV8 630 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 CCT8L1PA6NM43 557 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 MARK3P27448 753 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 TRIM60Q495X7 471 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 RCOR2Q8IZ40 523 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 DDX47Q9H0S4 455 aaKnown RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 CDK8P49336 464 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 LAMB3Q13751 1172 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 DRAP1Q14919 205 aaPredicted RBP10.16□□□□□ -0.78
SNX1-202ENST00000380285 IZUMO3Q5VZ72 239 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 TEX2Q8IWB9 1127 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 SLC26A7Q8TE54 656 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 HSPH1Q92598 858 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 ORAI2Q96SN7 254 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 ADA2Q9NZK5 511 aa10.16□□□□□ -0.78
SNX1-202ENST00000380285 SYNJ2BP-COX16A0A087WUM0 186 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 SNRPFP62306 86 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 MYLK4Q86YV6 388 aaPredicted RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 BFARQ9NZS9 450 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 COX16Q9P0S2 106 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 PSMC3IPQ9P2W1 217 aaPredicted RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 UBN2Q6ZU65 1347 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 EFCAB14O75071 495 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 FTLP02792 175 aaPredicted RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 SCP2P22307 547 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 KRT76Q01546 638 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 PDIA2Q13087 525 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 PROSER3Q2NL68 480 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 FSD1LQ9BXM9 530 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 TRABDQ9H4I3 376 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 DCTN4Q9UJW0 460 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 SLC8A2Q9UPR5 921 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 CDHR2Q9BYE9 1310 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 CFAP69A5D8W1 941 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 HEATR6Q6AI08 1181 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 WDR93Q6P2C0 686 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 THAP11Q96EK4 314 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 PRMT1Q99873 361 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 STK33Q9BYT3 514 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 C2orf40Q9H1Z8 148 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 KCNF1Q9H3M0 494 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 ZCCHC17Q9NP64 241 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 UBN1Q9NPG3 1134 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 NXF1Q9UBU9 619 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 STAP1Q9ULZ2 295 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 GLI2P10070 1586 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 MEIS1O00470 390 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 FAM47CQ5HY64 1035 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 MAML3Q96JK9 1138 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 ZWILCHQ9H900 591 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 NSMCE4AQ9NXX6 385 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 CPDO75976 1380 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 RANBP1P43487 201 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 USP17L2Q6R6M4 530 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 CLEC4GQ6UXB4 293 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 DNAJC9Q8WXX5 260 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 COA7Q96BR5 231 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 XPO6Q96QU8 1125 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 PALMDQ9NP74 551 aa10.15□□□□□ -0.78
SNX1-202ENST00000380285 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.15□□□□□ -0.78
SNX1-202ENST00000380285 KRR1Q13601 381 aaKnown RBP10.15□□□□□ -0.79
SNX1-202ENST00000380285 TSSK1BQ9BXA7 367 aa10.15□□□□□ -0.79
SNX1-202ENST00000380285 ISCUQ9H1K1 167 aa10.15□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms