RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 HSPA6P17066 643 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 ITGB5P18084 799 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 OAZ1P54368 228 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 HNRNPH2P55795 449 aaKnown RBP13.24□□□□□ -0.29
UBR4-203ENST00000375225 FKBP1BP68106 108 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 MTMR3Q13615 1198 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 KIF22Q14807 665 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 CPXCR1Q8N123 301 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 SLC30A5Q8TAD4 765 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 ATG4CQ96DT6 458 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 MS4A14Q96JA4 679 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 AGBL1Q96MI9 1066 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 FAM107BQ9H098 131 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 C17orf75Q9HAS0 396 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 TMEM59LQ9UK28 342 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 TTC7AQ9ULT0 858 aaPredicted RBP13.24□□□□□ -0.29
UBR4-203ENST00000375225 ZNF536O15090 1300 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 SMCHD1A6NHR9 2005 aa13.24□□□□□ -0.29
UBR4-203ENST00000375225 MIF4GDA9UHW6 222 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 MYBL2P10244 700 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 SCP2P22307 547 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 CCND2P30279 289 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 YWHABP31946 246 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 RARRES1P49788 294 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 DNA2P51530 1060 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 GALCP54803 685 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 GTF2BQ00403 316 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 KCNA1Q09470 495 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 GADL1Q6ZQY3 521 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 GSPT2Q8IYD1 628 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 RASGEF1CQ8N431 466 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 C1orf131Q8NDD1 294 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 SCFD2Q8WU76 684 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 CLEC4DQ8WXI8 215 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 IFT81Q8WYA0 676 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 CDHR1Q96JP9 859 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 SH3GL2Q99962 352 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 ISCUQ9H1K1 167 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 ZNF408Q9H9D4 720 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 RAVER2Q9HCJ3 691 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 USP20Q9Y2K6 914 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 A0A0G2JLL6 359 aaPredicted RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 KRIT1O00522 736 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 POTEJP0CG39 1038 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 GYS2P54840 703 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 HADHBP55084 474 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 MAPK7Q13164 816 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 DMP1Q13316 513 aaPredicted RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 ZNF746Q6NUN9 644 aaPredicted RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 LRIG3Q6UXM1 1119 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 RNF207Q6ZRF8 634 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 MOB2Q70IA6 237 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 PRRT2Q7Z6L0 340 aaPredicted RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 CD302Q8IX05 232 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 UBL4BQ8N7F7 174 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 SYTL5Q8TDW5 730 aaPredicted RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 HDAC7Q8WUI4 952 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 KIFAP3Q92845 792 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 OPTNQ96CV9 577 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 AGPAT1Q99943 283 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 RAB17Q9H0T7 212 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 FAM114A2Q9NRY5 505 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 SEPT11Q9NVA2 429 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 KCNH4Q9UQ05 1017 aa13.23□□□□□ -0.29
UBR4-203ENST00000375225 UTP11Q9Y3A2 253 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 NOC2LQ9Y3T9 749 aaKnown RBP13.23□□□□□ -0.29
UBR4-203ENST00000375225 A0A0G2JMZ2 1700 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 IRF6O14896 467 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 STAM2O75886 525 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 GGPS1O95749 300 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 GBP1P32455 592 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 GTF2H1P32780 548 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 MXI1P50539 228 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 MFAP3P55082 362 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 NCKAP1LP55160 1127 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 HLTFQ14527 1009 aaKnown RBP eCLIP13.22□□□□□ -0.298e-7■□□□□ 10.6
UBR4-203ENST00000375225 PGM5Q15124 567 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 TCEAL1Q15170 157 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 CBWD6Q4V339 395 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 CBWD3Q5JTY5 395 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 CBWD5Q5RIA9 395 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 LDLRAD1Q5T700 205 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 FASTKD5Q7L8L6 764 aaKnown RBP13.22□□□□□ -0.29
UBR4-203ENST00000375225 HAUS6Q7Z4H7 955 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 EMSYQ7Z589 1322 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 NT5DC3Q86UY8 548 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 KLHL7Q8IXQ5 586 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 ATP6V0A1Q93050 837 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 GPRASP2Q96D09 838 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 HES6Q96HZ4 224 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 GDAP1L1Q96MZ0 367 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 SENP7Q9BQF6 1050 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 CARD9Q9H257 536 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 SMARCAL1Q9NZC9 954 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 HSPBP1Q9NZL4 362 aa13.22□□□□□ -0.29
UBR4-203ENST00000375225 EHD2Q9NZN4 543 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms