RNA–Protein interactions for RNA: ENST00000374516.7

PHF1-202, Transcript of PHD finger protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF1, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-202ENST00000374516 MAPK7Q13164 816 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 TREML2Q5T2D2 321 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 ILDR2Q71H61 639 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 FRMD5Q7Z6J6 570 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.32■□□□□ 0.52
PHF1-202ENST00000374516 TEX13BQ9BXU2 312 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 KCND2Q9NZV8 630 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 TCEAL9Q9UHQ7 104 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 ODF2LQ9ULJ1 636 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 RLFQ13129 1914 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 COL11A1P12107 1806 aaPredicted RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 MYZAPP0CAP1 466 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 ACTN1P12814 892 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 XRCC5P13010 732 aaKnown RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 YWHABP31946 246 aaKnown RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 HSD17B3P37058 310 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 PLCB4Q15147 1175 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 NOL9Q5SY16 702 aaKnown RBP18.32■□□□□ 0.52
PHF1-202ENST00000374516 CCDC13Q8IYE1 715 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 CENPHQ9H3R5 247 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 KLC4Q9NSK0 619 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 ADAMTS1Q9UHI8 967 aa18.32■□□□□ 0.52
PHF1-202ENST00000374516 H0YGN5 161 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 EIF3DO15371 548 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHF1-202ENST00000374516 RASSF9O75901 435 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 SLC9A1P19634 815 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 ECHS1P30084 290 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 OAZ1P54368 228 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 ERVK-9P63128 1117 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 SP4Q02446 784 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 HLTFQ14527 1009 aaKnown RBP eCLIP18.31■□□□□ 0.52
PHF1-202ENST00000374516 CYFIP2Q96F07 1278 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 PACSIN1Q9BY11 444 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 ADARB2Q9NS39 739 aaKnown RBP18.31■□□□□ 0.52
PHF1-202ENST00000374516 HOXC10Q9NYD6 342 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 CYP39A1Q9NYL5 469 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 TELO2Q9Y4R8 837 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 NFS1Q9Y697 457 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 PARP14Q460N5 1801 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 GMNCA6NCL1 334 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 CHUKO15111 745 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 RGS20O76081 388 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 CCND2P30279 289 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 ARID5AQ03989 594 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 DRP2Q13474 957 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 PLA2G4FQ68DD2 849 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 SULF1Q8IWU6 871 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 NSUN6Q8TEA1 469 aaKnown RBP18.31■□□□□ 0.52
PHF1-202ENST00000374516 DCPSQ96C86 337 aaKnown RBP18.31■□□□□ 0.52
PHF1-202ENST00000374516 CD248Q9HCU0 757 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 SEL1LQ9UBV2 794 aa18.31■□□□□ 0.52
PHF1-202ENST00000374516 CES2O00748 559 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 NPEPPSP55786 919 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 ENOX2Q16206 610 aaKnown RBP18.3■□□□□ 0.52
PHF1-202ENST00000374516 RPAINQ86UA6 219 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 TAF4BQ92750 862 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 ACAD9Q9H845 621 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 GPRC5CQ9NQ84 441 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 AIPL1Q9NZN9 384 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 PHIPQ8WWQ0 1821 aa18.3■□□□□ 0.52
PHF1-202ENST00000374516 KCNK3O14649 394 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 BACH1O14867 736 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 AFPP02771 609 aaKnown RBP18.29■□□□□ 0.52
PHF1-202ENST00000374516 CYP2J2P51589 502 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 KLHL30Q0D2K2 578 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 CUL1Q13616 776 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 RPS6KA1Q15418 735 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 NLRX1Q86UT6 975 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 OR2W6PQ8NHA6 318 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 SCFD2Q8WU76 684 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 K7ENM7 598 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 CCDC172P0C7W6 258 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 UAP1Q16222 522 aaPredicted RBP18.29■□□□□ 0.52
PHF1-202ENST00000374516 MOB2Q70IA6 237 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 SYCP3Q8IZU3 236 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 C3orf20Q8ND61 904 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 SLC35C1Q96A29 364 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 LRRC45Q96CN5 670 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 DDX20Q9UHI6 824 aaKnown RBP18.29■□□□□ 0.52
PHF1-202ENST00000374516 SLC12A6Q9UHW9 1150 aa18.29■□□□□ 0.52
PHF1-202ENST00000374516 CTNNA1P35221 906 aaKnown RBP18.28■□□□□ 0.52
PHF1-202ENST00000374516 PSMC5P62195 406 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 RAPGEF1Q13905 1077 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 RDH13Q8NBN7 331 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 AGPAT3Q9NRZ7 376 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 DBR1Q9UK59 544 aaKnown RBP18.28■□□□□ 0.52
PHF1-202ENST00000374516 TISP43B9A030 160 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 ATP2A1O14983 1001 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 TRAPPC3O43617 180 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 PPP1R12BO60237 982 aaPredicted RBP18.28■□□□□ 0.52
PHF1-202ENST00000374516 YBX3P16989 372 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHF1-202ENST00000374516 KRT76Q01546 638 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 ZNF844Q08AG5 666 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 XKR9Q5GH70 373 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 CCDC121Q6ZUS5 278 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 HS2ST1Q7LGA3 356 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 DDX42Q86XP3 938 aaKnown RBP eCLIP18.28■□□□□ 0.52
PHF1-202ENST00000374516 FAM186BQ8IYM0 893 aa18.28■□□□□ 0.52
PHF1-202ENST00000374516 FAM133AQ8N9E0 248 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms