RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 CCDC84Q86UT8 332 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 GPBAR1Q8TDU6 330 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 SYAP1Q96A49 352 aaPredicted RBP4□□□□□ -1.77
ECHDC1-205ENST00000368295 ANAPC16Q96DE5 110 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 RHOVQ96L33 236 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 MXD3Q9BW11 206 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 ABCG4Q9H172 646 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 SUGCTQ9HAC7 445 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 FBRSQ9HAH7 460 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 PDRG1Q9NUG6 133 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 KBTBD4Q9NVX7 518 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 NIP7Q9Y221 180 aaKnown RBP eCLIP4□□□□□ -1.77
ECHDC1-205ENST00000368295 LTBP2Q14767 1821 aa4□□□□□ -1.77
ECHDC1-205ENST00000368295 BTBD19C9JJ37 291 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 TOR1BO14657 336 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SART1O43290 800 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 PRPF3O43395 683 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 HTATSF1O43719 755 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 GAS2O43903 313 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF862O60290 1169 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 PLOD3O60568 738 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 COQ9O75208 318 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 RFPL3O75679 317 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ABLIM3O94929 683 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SLFN14P0C7P3 912 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ALADP13716 330 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 IL9P15248 144 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 GLB1P16278 677 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ADD2P35612 726 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 RAD52P43351 418 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 STT3AP46977 705 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 IREB2P48200 963 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 GTF2A2P52657 109 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 VCPP55072 806 aaKnown RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 MTERF2Q49AM1 385 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 MINDY4Q4G0A6 757 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 RILPL1Q5EBL4 403 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF530Q6P9A1 599 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 C17orf99Q6UX52 265 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF713Q8N859 430 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SPATA5Q8NB90 893 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ZSWIM2Q8NEG5 633 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 FLCNQ8NFG4 579 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 GRIN3AQ8TCU5 1115 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 GAL3ST3Q96A11 431 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 COG3Q96JB2 828 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 TNIP3Q96KP6 325 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 MFSD14AQ96MC6 490 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 WDR18Q9BV38 432 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SLC12A5Q9H2X9 1139 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 UNC45AQ9H3U1 944 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 COPRSQ9NQ92 184 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SMYD2Q9NRG4 433 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 TBC1D22BQ9NU19 505 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 KLHL11Q9NVR0 708 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ARGLU1Q9NWB6 273 aaPredicted RBP3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 CACNA2D2Q9NY47 1150 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 SLC5A4Q9NY91 659 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 TPCN1Q9ULQ1 816 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ATP6V0A2Q9Y487 856 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 EVC2Q86UK5 1308 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 DUOX1Q9NRD9 1551 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 RTL1A6NKG5 1358 aa3.99□□□□□ -1.77
ECHDC1-205ENST00000368295 ST20-MTHFSA0A0A6YYL1 179 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 A0A1B0GVC2 190 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ABHD14A-ACY1A0A1B0GW23 586 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ALX3O95076 343 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 DLGAP3O95886 979 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PF4P02776 101 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ADH5P11766 374 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 GLULP15104 373 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ZSCAN20P17040 1043 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 GRK2P25098 689 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 RPS12P25398 132 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 HOXD10P28358 340 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 IL6STP40189 918 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MTHFSP49914 203 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ID3Q02535 119 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MTMR1Q13613 665 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SEPT6Q14141 434 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 GBX1Q14549 363 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 PDCD2Q16342 344 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SPATA1Q5VX52 437 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ZCCHC8Q6NZY4 707 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 C16orf87Q6PH81 154 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FAM178BQ8IXR5 827 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 KIAA2013Q8IYS2 634 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 CCAR2Q8N163 923 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 CELF2-AS1Q8N7Q2 184 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MNS1Q8NEH6 495 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SH3KBP1Q96B97 665 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 ZNF669Q96BR6 464 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 MPHOSPH9Q99550 1183 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 SMAD5Q99717 465 aaKnown RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 FSD1Q9BTV5 496 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 TRIM6Q9C030 488 aaPredicted RBP3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 NKX2-4Q9H2Z4 354 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 CYP4F11Q9HBI6 524 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 HELLSQ9NRZ9 838 aa3.98□□□□□ -1.77
ECHDC1-205ENST00000368295 NKIRAS2Q9NYR9 191 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms