RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 CXCL17Q6UXB2 119 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 LXNQ9BS40 222 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 MRIQ9BWK5 157 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 TMX2Q9Y320 296 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 PTCH2Q9Y6C5 1203 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 MIF4GDA9UHW6 222 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 GFPT2O94808 682 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 CHGBP05060 677 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 CPB1P15086 417 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 TBXAS1P24557 533 aaPredicted RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 ALDH7A1P49419 539 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 KCNH2Q12809 1159 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 BFSP1Q12934 665 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 FAM110CQ1W6H9 321 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 AFG1LQ8WV93 481 aa7.56□□□□□ -1.2
RAB5B-201ENST00000360299 XIRP1Q702N8 1843 aaKnown RBP7.56□□□□□ -1.2
RAB5B-201ENST00000360299 GOLGA8KD6RF30 607 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TLR2O60603 784 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 DGAT1O75907 488 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF286BP0CG31 522 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 MESDQ14696 234 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 KRT71Q3SY84 523 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 XKR3Q5GH77 459 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ATP2A3Q93084 1043 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TMEM169Q96HH4 297 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TINF2Q9BSI4 451 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 JMJD4Q9H9V9 463 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ABHD10Q9NUJ1 306 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ATP8B3O60423 1300 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 CCDC188H7C350 402 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SLC16A3O15427 465 aaKnown RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ADCY8P40145 1251 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF280AP59817 542 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 PTGISQ16647 500 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 FYB2Q5VWT5 728 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 GLB1LQ6UWU2 654 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 PPP1R21Q6ZMI0 780 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 RSRC2Q7L4I2 434 aaKnown RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 METTL16Q86W50 562 aaKnown RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 C11orf49Q9H6J7 331 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 LIMA1Q9UHB6 759 aaKnown RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 FBXL21Q9UKT6 434 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SLC4A7Q9Y6M7 1214 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 A6NJR5 290 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 VWA5AO00534 786 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 KPNA6O60684 536 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TADA2AO75478 443 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ICAM1P05362 532 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 GJB1P08034 283 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 BTG3Q14201 252 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 EDRF1Q3B7T1 1238 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SMAP1Q8IYB5 467 aaPredicted RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 CERS4Q9HA82 394 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 KIF9Q9HAQ2 790 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ERAP1Q9NZ08 941 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SYNPO2Q9UMS6 1093 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 PKD1L3Q7Z443 1732 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 UBE4BO95155 1302 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 A0A087WWV3 80 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TCRBV5S4A2TA0A5A2 114 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 POTEFA5A3E0 1075 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 CCDC151A5D8V7 595 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 EGFRP00533 1210 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 DPYDQ12882 1025 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SEC23AQ15436 765 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ZNF667Q5HYK9 610 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 DNAJC24Q6P3W2 148 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 SCYL2Q6P3W7 929 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 POTEGQ6S5H5 508 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 POTEEQ6S8J3 1075 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 ADSSL1Q8N142 457 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 AFAP1L2Q8N4X5 818 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 MAGOHBQ96A72 148 aaKnown RBP7.55□□□□□ -1.2
RAB5B-201ENST00000360299 PGBD4Q96DM1 585 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 GMCL1Q96IK5 515 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 PRDM10Q9NQV6 1147 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 DNAJC12Q9UKB3 198 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 TAF6LQ9Y6J9 622 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 IRS2Q9Y4H2 1338 aa7.55□□□□□ -1.2
RAB5B-201ENST00000360299 RGS16O15492 202 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 COBLO75128 1261 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 GNRH1P01148 92 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 IFNB1P01574 187 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 RPA1P27694 616 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CTNNA1P35221 906 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CCDC85BQ15834 202 aaPredicted RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 GLE1Q53GS7 698 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MORC4Q8TE76 937 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MRPL4Q9BYD3 311 aaKnown RBP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MCOLN1Q9GZU1 580 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.54□□□□□ -1.2
RAB5B-201ENST00000360299 PCDHB12Q9Y5F1 795 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 MRC1P22897 1456 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 SOWAHDA6NJG2 315 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 LRRN2O75325 713 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 ATF2P15336 505 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 VAMP7P51809 220 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 EPHB4P54760 987 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 KRT39Q6A163 491 aa7.54□□□□□ -1.2
RAB5B-201ENST00000360299 CC2D1AQ6P1N0 951 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms