RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 NLRP1Q9C000 1473 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 VAMP7P51809 220 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 C3orf20Q8ND61 904 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 HIC2Q96JB3 615 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 RAD17O75943 681 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 GRAPQ13588 217 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 ZNF667Q5HYK9 610 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 SLFN12LQ6IEE8 588 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 REXO1L1PQ8IX06 675 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 GRAPLQ8TC17 118 aaPredicted RBP17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 NRBF2Q96F24 287 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 DLGAP2Q9P1A6 1054 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 SAMD9LQ8IVG5 1584 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 BCORL1Q5H9F3 1711 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 PHF20L1A8MW92 1017 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 TCP11X1B4DZS4 312 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 KRT14P02533 472 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 ABCD1P33897 745 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 PRELPP51888 382 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 SMAD1Q15797 465 aaKnown RBP17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 SPATA21Q7Z572 469 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 PNKPQ96T60 521 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 PRMT1Q99873 361 aaKnown RBP17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 CYP4F11Q9HBI6 524 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 MINPP1Q9UNW1 487 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 OR2W6PQ8NHA6 318 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 BTBD6Q96KE9 485 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 LBHD1Q9BQE6 289 aaPredicted RBP17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 SLC13A1Q9BZW2 595 aa17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 ALG13Q9NP73 1137 aaKnown RBP17.51■□□□□ 0.39
SH3RF1-201ENST00000284637 TTC13Q8NBP0 860 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TRIM9Q9C026 710 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 IL25Q9H293 177 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 PAPOLBQ9NRJ5 636 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 HNRNPCL1O60812 293 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 PAX7P23759 505 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 FOXD4Q12950 439 aaPredicted RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 KCNB1Q14721 858 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 NAALADL2Q58DX5 795 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 SRBD1Q8N5C6 995 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 USP15Q9Y4E8 981 aaPredicted RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 F5H423 210 aaPredicted RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TFDP2Q14188 446 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 IZUMO3Q5VZ72 239 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 ANO5Q75V66 913 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 FOXP4Q8IVH2 680 aaPredicted RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 SNF8Q96H20 258 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 XPO6Q96QU8 1125 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TRIM51Q9BSJ1 452 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TAF6LQ9Y6J9 622 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 PAPOLAP51003 745 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 KIF19Q2TAC6 998 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TAF1BQ53T94 588 aaPredicted RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 HABP4Q5JVS0 413 aaKnown RBP17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TMEM179Q6ZVK1 233 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 USP6NLQ92738 828 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 TUBE1Q9UJT0 475 aa17.5■□□□□ 0.39
SH3RF1-201ENST00000284637 LPXNO60711 386 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SERPINB4P48594 390 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 FAM160B2Q86V87 743 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 ADSSL1Q8N142 457 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 FAM20AQ96MK3 541 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 RBM12Q9NTZ6 932 aaKnown RBP17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SATB2Q9UPW6 733 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 OR6B3Q8NGW1 331 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 ZIM3Q96PE6 472 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 CDHR2Q9BYE9 1310 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 ANP32DO95626 131 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SURF1Q15526 300 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 FSCBQ5H9T9 825 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 MYCBPAPQ8TBZ2 947 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 ANKARQ7Z5J8 1434 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SOX5P35711 763 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 KRT17Q04695 432 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 DPYDQ12882 1025 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 MTMR1Q13613 665 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SLC44A4Q53GD3 710 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SWT1Q5T5J6 900 aaKnown RBP17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 WNT8AQ9H1J5 351 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 CLDN3O15551 220 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 NT5C2P49902 561 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 CYLC2Q14093 348 aaPredicted RBP17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 DHX34Q14147 1143 aaKnown RBP17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 AGBL2Q5U5Z8 902 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 DPP9Q86TI2 863 aa17.49■□□□□ 0.39
SH3RF1-201ENST00000284637 MED14O60244 1454 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 DENND3A2RUS2 1198 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 SRGNP10124 158 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 HSPA8P11142 646 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 KLC3Q6P597 504 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 KDM7AQ6ZMT4 941 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 VPS39Q96JC1 886 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 FUCA2Q9BTY2 467 aa17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 EIF2AQ9BY44 585 aaKnown RBP17.48■□□□□ 0.39
SH3RF1-201ENST00000284637 TRPV6Q9H1D0 765 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms