RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 GNGT1P63211 74 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 DNAAF5Q86Y56 855 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 AGBL1Q96MI9 1066 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 GLIS2Q9BZE0 524 aaPredicted RBP27.1■■□□□ 1.93
ROM1-201ENST00000278833 OSGEPQ9NPF4 335 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 SLTMQ9NWH9 1034 aaKnown RBP eCLIP27.1■■□□□ 1.93
ROM1-201ENST00000278833 LCMT1Q9UIC8 334 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 EMSYQ7Z589 1322 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 ATXN2Q99700 1313 aaKnown RBP27.1■■□□□ 1.93
ROM1-201ENST00000278833 IQCA1LA6NCM1 817 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 MIF4GDA9UHW6 222 aaKnown RBP27.1■■□□□ 1.93
ROM1-201ENST00000278833 KRT14P02533 472 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 HSPA6P17066 643 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 PTENP60484 403 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 C1orf220Q5T0J3 134 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 XXYLT1Q8NBI6 393 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 IL31RAQ8NI17 732 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 HOOK2Q96ED9 719 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 KIAA1683Q9H0B3 1180 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 VEZTQ9HBM0 779 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 TMBIM4Q9HC24 238 aa27.1■■□□□ 1.93
ROM1-201ENST00000278833 SCN4AP35499 1836 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 H0YGN5 161 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 CORO7P57737 925 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 TRADDQ15628 312 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 RDM1Q8NG50 284 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 MORC4Q8TE76 937 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 AP1M1Q9BXS5 423 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 DDX47Q9H0S4 455 aaKnown RBP27.09■■□□□ 1.93
ROM1-201ENST00000278833 SLC38A10Q9HBR0 1119 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 ANKEF1Q9NU02 776 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 NFS1Q9Y697 457 aa27.09■■□□□ 1.93
ROM1-201ENST00000278833 FOXN3O00409 490 aaPredicted RBP27.08■■□□□ 1.93
ROM1-201ENST00000278833 NFIBO00712 420 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 JAK3P52333 1124 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 MRPS9P82933 396 aaKnown RBP27.08■■□□□ 1.93
ROM1-201ENST00000278833 ZYXQ15942 572 aaKnown RBP27.08■■□□□ 1.93
ROM1-201ENST00000278833 DCAF12L1Q5VU92 463 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 CDAN1Q8IWY9 1227 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 EFCAB13Q8IY85 973 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 SYTL5Q8TDW5 730 aaPredicted RBP27.08■■□□□ 1.93
ROM1-201ENST00000278833 ARHGEF26Q96DR7 871 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 RSPH14Q9UHP6 348 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 PPP1R9AQ9ULJ8 1098 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 PLAAQ9Y263 795 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 PHF20L1A8MW92 1017 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 EPHX2P34913 555 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 HSD17B3P37058 310 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 PPP3CAQ08209 521 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 HLTFQ14527 1009 aaKnown RBP eCLIP27.08■■□□□ 1.93
ROM1-201ENST00000278833 RAB17Q9H0T7 212 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 HSPBP1Q9NZL4 362 aa27.08■■□□□ 1.93
ROM1-201ENST00000278833 ASTN2O75129 1339 aaPredicted RBP27.08■■□□□ 1.93
ROM1-201ENST00000278833 FAM187AA6NFU0 413 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 GZMAP12544 262 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 ITGA4P13612 1032 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 SFNP31947 248 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 UAP1Q16222 522 aaPredicted RBP27.07■■□□□ 1.92
ROM1-201ENST00000278833 PAGR1Q9BTK6 254 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 THAP2Q9H0W7 228 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 RASSF4Q9H2L5 321 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.07■■□□□ 1.92
ROM1-201ENST00000278833 SYNGAP1Q96PV0 1343 aa27.07■■□□□ 1.92
ROM1-201ENST00000278833 ARID2Q68CP9 1835 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 EGFRP00533 1210 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 FDX1P10109 184 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 NR1D1P20393 614 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 ZNF280AP59817 542 aaPredicted RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 BIRC3Q13489 604 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 MTMR1Q13613 665 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 XRRA1Q6P2D8 792 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 SAMD7Q7Z3H4 446 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 RPS6KC1Q96S38 1066 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 ZNF341Q9BYN7 854 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 GOLGA6L10A0A0M3HER8 536 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 TULP1O00294 542 aaPredicted RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 YWHABP31946 246 aaKnown RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 DHX34Q14147 1143 aaKnown RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 HAUS6Q7Z4H7 955 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 ARHGEF19Q8IW93 802 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 ARFGAP2Q8N6H7 521 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 RNPC3Q96LT9 517 aaKnown RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 ADARB2Q9NS39 739 aaKnown RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 EXOC7Q9UPT5 735 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 COQ4Q9Y3A0 265 aa27.06■■□□□ 1.92
ROM1-201ENST00000278833 UTP11Q9Y3A2 253 aaKnown RBP27.06■■□□□ 1.92
ROM1-201ENST00000278833 DDX39AO00148 427 aaKnown RBP27.05■■□□□ 1.92
ROM1-201ENST00000278833 GGPS1O95749 300 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 FGGP02679 453 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 DRG2P55039 364 aaKnown RBP27.05■■□□□ 1.92
ROM1-201ENST00000278833 PSMC5P62195 406 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 DLG4P78352 724 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 KRT76Q01546 638 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 ARHGAP44Q17R89 818 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 WDR81Q562E7 1941 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 AGBL2Q5U5Z8 902 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 MIGA2Q7L4E1 593 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 FAM71AQ8IYT1 594 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 CBWD1Q9BRT8 395 aa27.05■■□□□ 1.92
ROM1-201ENST00000278833 NEUROG2Q9H2A3 272 aa27.05■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms