RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 MMP13P45452 471 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 SF3A3Q12874 501 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNX4-201ENST00000251775 RSBN1LQ6PCB5 846 aaPredicted RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 HOOK3Q86VS8 718 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 KCTD17Q8N5Z5 321 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 MYCT1Q8N699 235 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 BORCS6Q96GS4 357 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 HES6Q96HZ4 224 aa20.45■□□□□ 0.86
SNX4-201ENST00000251775 WRAP73Q9P2S5 460 aaPredicted RBP20.45■□□□□ 0.86
SNX4-201ENST00000251775 GOLGB1Q14789 3259 aaKnown RBP20.44■□□□□ 0.86
SNX4-201ENST00000251775 RAD17O75943 681 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 PRKCIP41743 596 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
SNX4-201ENST00000251775 STAMBPL1Q96FJ0 436 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 EBF2Q9HAK2 575 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 MYH11P35749 1972 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 FLOT1O75955 427 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 NUDT17P0C025 328 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 PRELPP51888 382 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 TRAF1Q13077 416 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 DAAM2Q86T65 1068 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 KSR1Q8IVT5 923 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 LMBR1Q8WVP7 490 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 TCP11Q8WWU5 503 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 ZDHHC18Q9NUE0 388 aa20.44■□□□□ 0.86
SNX4-201ENST00000251775 A0A0A6YYK5 440 aaPredicted RBP20.43■□□□□ 0.86
SNX4-201ENST00000251775 GAS7O60861 476 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 FGGP02679 453 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 ARP10275 920 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 SLC15A2Q16348 729 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 GJB7Q6PEY0 223 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 CRELD2Q6UXH1 353 aaPredicted RBP20.43■□□□□ 0.86
SNX4-201ENST00000251775 LRRC34Q8IZ02 419 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 HOOK2Q96ED9 719 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 SELENOSQ9BQE4 189 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 ATP8B3O60423 1300 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 EIF3DO15371 548 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNX4-201ENST00000251775 VIL1P09327 827 aaKnown RBP20.43■□□□□ 0.86
SNX4-201ENST00000251775 H2AFZP0C0S5 128 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 RIPK1Q13546 671 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 NAA25Q14CX7 972 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 DLGAP5Q15398 846 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 CEP55Q53EZ4 464 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 H2AFVQ71UI9 128 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 SYCE1Q8N0S2 351 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 CHURC1Q8WUH1 139 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 PGM2Q96G03 612 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 FIZ1Q96SL8 496 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 MTFR1LQ9H019 292 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 RAB17Q9H0T7 212 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 FBXO28Q9NVF7 368 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 GCNT4Q9P109 453 aa20.43■□□□□ 0.86
SNX4-201ENST00000251775 TTC7AQ9ULT0 858 aaPredicted RBP20.43■□□□□ 0.86
SNX4-201ENST00000251775 ZBTB12Q9Y330 459 aaPredicted RBP20.43■□□□□ 0.86
SNX4-201ENST00000251775 BUB1BO60566 1050 aaPredicted RBP20.42■□□□□ 0.86
SNX4-201ENST00000251775 SLC8A3P57103 927 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 COG2Q14746 738 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 MAB21L3Q8N8X9 362 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 GMLQ99445 158 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 GLIS2Q9BZE0 524 aaPredicted RBP20.42■□□□□ 0.86
SNX4-201ENST00000251775 UNC45AQ9H3U1 944 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 NEBLO76041 1014 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 CLTAP09496 248 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 JAM2P57087 298 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 PTENP60484 403 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 DUPD1Q68J44 220 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 MIGA2Q7L4E1 593 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 RNF25Q96BH1 459 aaPredicted RBP20.42■□□□□ 0.86
SNX4-201ENST00000251775 PABPC3Q9H361 631 aaKnown RBP20.42■□□□□ 0.86
SNX4-201ENST00000251775 PARVGQ9HBI0 331 aa20.42■□□□□ 0.86
SNX4-201ENST00000251775 MRPL11Q9Y3B7 192 aaKnown RBP20.42■□□□□ 0.86
SNX4-201ENST00000251775 DDX3XO00571 662 aaKnown RBP eCLIP20.41■□□□□ 0.862e-8■■■■■ 31.5
SNX4-201ENST00000251775 MYO1EQ12965 1108 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 DCAF12L1Q5VU92 463 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 TBC1D1Q86TI0 1168 aaPredicted RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 NSMCE1Q8WV22 266 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 ZNF577Q9BSK1 485 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 TRIM6Q9C030 488 aaPredicted RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 TMEM39BQ9GZU3 492 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 TNS1Q9HBL0 1735 aaKnown RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 FRMPD4Q14CM0 1322 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 COL4A5P29400 1685 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 PMS2P54278 862 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 NPEPPSP55786 919 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 SPDYE2Q495Y8 402 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 TRPM8Q7Z2W7 1104 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 PNMA8AQ86V59 439 aaPredicted RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 FAM186BQ8IYM0 893 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 NEK9Q8TD19 979 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 RSRC1Q96IZ7 334 aaKnown RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 ELAC2Q9BQ52 826 aaKnown RBP20.41■□□□□ 0.86
SNX4-201ENST00000251775 ERP44Q9BS26 406 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 AMFRQ9UKV5 643 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 AGAP1Q9UPQ3 857 aa20.41■□□□□ 0.86
SNX4-201ENST00000251775 COPB2P35606 906 aa20.4■□□□□ 0.86
SNX4-201ENST00000251775 IFI35P80217 286 aaPredicted RBP20.4■□□□□ 0.86
SNX4-201ENST00000251775 FAM133BQ5BKY9 247 aaKnown RBP20.4■□□□□ 0.86
SNX4-201ENST00000251775 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
SNX4-201ENST00000251775 LDHDQ86WU2 507 aa20.4■□□□□ 0.86
SNX4-201ENST00000251775 AZI2Q9H6S1 392 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms