RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 ACTN1P12814 892 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 ERCC3P19447 782 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 RNASE9P60153 205 aaKnown RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 RBL2Q08999 1139 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 PPFIA1Q13136 1202 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 ZNF211Q13398 564 aaPredicted RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 CCDC6Q16204 474 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 KNOP1Q1ED39 458 aaKnown RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 CEP55Q53EZ4 464 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 DNAJC21Q5F1R6 531 aaKnown RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 TRIM72Q6ZMU5 477 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 TOGARAM2Q6ZUX3 1019 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 USP50Q70EL3 339 aaPredicted RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 B4GALNT4Q76KP1 1039 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 ERICH1Q86X53 443 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 SFR1Q86XK3 245 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 C10orf67Q8IYJ2 551 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 GPT2Q8TD30 523 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 PPP4R1Q8TF05 950 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 DEFB129Q9H1M3 183 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 NDST4Q9H3R1 872 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 MROH8Q9H579 483 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 FAM196BA6NMK8 535 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 BUB1O43683 1085 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 IL18RAPO95256 599 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 YWHABP31946 246 aaKnown RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 TAP1Q03518 808 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 SNX17Q15036 470 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 STILQ15468 1287 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 DGKDQ16760 1214 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 LONRF3Q496Y0 759 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 KRT39Q6A163 491 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 RNF180Q86T96 592 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 ERO1BQ86YB8 467 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 LRRC8AQ8IWT6 810 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 MORC4Q8TE76 937 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 SEPT1Q8WYJ6 367 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 HVCN1Q96D96 273 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 NIFKQ9BYG3 293 aaKnown RBP4.56□□□□□ -1.68
CFTR-201ENST00000003084 SLC38A7Q9NVC3 462 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 VPS18Q9P253 973 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 BCAP29Q9UHQ4 241 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 ZNF536O15090 1300 aa4.56□□□□□ -1.68
CFTR-201ENST00000003084 KIF28PB7ZC32 967 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 DGAT1O75907 488 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 NDUFB10O96000 172 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SRGNP10124 158 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 MUTP22033 750 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CDC27P30260 824 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CASP14P31944 242 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 OSTNP61366 133 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 ARHGEF18Q6ZSZ5 1173 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 PLEKHH3Q7Z736 793 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SRRM1Q8IYB3 904 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 DAGLBQ8NCG7 672 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 BAP1Q92560 729 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 PHF20Q9BVI0 1012 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.55□□□□□ -1.68
CFTR-201ENST00000003084 OGFRQ9NZT2 677 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SUCLA2Q9P2R7 463 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 SYNJ2BP-COX16A0A087WUM0 186 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 MANSC4A6NHS7 340 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 POLRMTO00411 1230 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 RARAP10276 462 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RALAP11233 206 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 KRT15P19012 456 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CA4P22748 312 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RASSF7Q02833 373 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 ALKBH2Q6NS38 261 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RYBPQ8N488 228 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 C12orf50Q8NA57 414 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 PIGOQ8TEQ8 1089 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 ACAP3Q96P50 834 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 PPP1R16BQ96T49 567 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 EPYCQ99645 322 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 TRIM31Q9BZY9 425 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.55□□□□□ -1.68
CFTR-201ENST00000003084 COX16Q9P0S2 106 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SLC16A4O15374 487 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 TLL1O43897 1013 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 GFPT2O94808 682 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 LARGE1O95461 756 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 ICAM1P05362 532 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CAP2P40123 477 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 VAMP7P51809 220 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 NFX1Q12986 1120 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 PPP2R5DQ14738 602 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 SNAP47Q5SQN1 464 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RNF219Q5W0B1 726 aaPredicted RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 FRMD5Q7Z6J6 570 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 VSTM4Q8IW00 320 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 GPC2Q8N158 579 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 ARHGAP24Q8N264 748 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 EPSTI1Q96J88 318 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 RIT2Q99578 217 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 MXRA8Q9BRK3 442 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 CARD6Q9BX69 1037 aa4.55□□□□□ -1.68
CFTR-201ENST00000003084 MOV10L1Q9BXT6 1211 aaKnown RBP4.55□□□□□ -1.68
CFTR-201ENST00000003084 ZNF148Q9UQR1 794 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms