RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 TMCO2Q7Z6W1 182 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-234ENST00000642041 MYOCDQ8IZQ8 938 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 INPP4AQ96PE3 977 aaPredicted RBP18.96■□□□□ 0.63
PHGDH-234ENST00000642041 TANC1Q9C0D5 1861 aa18.96■□□□□ 0.63
PHGDH-234ENST00000642041 A0A1B0GTH6 734 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 TBCAO75347 108 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 SLITRK3O94933 977 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 GJB5O95377 273 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 TUBB4AP04350 444 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 MAPTP10636 758 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 CYP11B2P19099 503 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 QARSP47897 775 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 ALDH5A1P51649 535 aaPredicted RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 PURAQ00577 322 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 TCF15Q12870 199 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 TMEM63BQ5T3F8 832 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 GPBP1Q86WP2 473 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 C4orf19Q8IY42 314 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 DNAJC19Q96DA6 116 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 PABPC5Q96DU9 382 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 MRPL38Q96DV4 380 aaKnown RBP18.95■□□□□ 0.62
PHGDH-234ENST00000642041 OLFML3Q9NRN5 406 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 CTNND2Q9UQB3 1225 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 PPME1Q9Y570 386 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 UBE4BO95155 1302 aa18.95■□□□□ 0.62
PHGDH-234ENST00000642041 RIF1Q5UIP0 2472 aaKnown RBP18.94■□□□□ 0.62
PHGDH-234ENST00000642041 SCN10AQ9Y5Y9 1956 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 AP5Z1O43299 807 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 PSMC5P62195 406 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 DEFB103AP81534 67 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 MRPS9P82933 396 aaKnown RBP18.94■□□□□ 0.62
PHGDH-234ENST00000642041 HSP90AA2PQ14568 343 aaPredicted RBP18.94■□□□□ 0.62
PHGDH-234ENST00000642041 SPECC1LQ69YQ0 1117 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 NFRKBQ6P4R8 1299 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 CCDC186Q7Z3E2 898 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 CSGALNACT2Q8N6G5 542 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 CYP2W1Q8TAV3 490 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 ATP6V0A1Q93050 837 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 CCDC51Q96ER9 411 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 CEP63Q96MT8 703 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 ANKEF1Q9NU02 776 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 MUTYHQ9UIF7 546 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 ITIH6Q6UXX5 1313 aa18.94■□□□□ 0.62
PHGDH-234ENST00000642041 TRIP12Q14669 1992 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 SSBP05455 408 aaKnown RBP eCLIP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 ARP10275 920 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 MYCLP12524 364 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 SFPQP23246 707 aaKnown RBP eCLIP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 GUCY2CP25092 1073 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 CLCN1P35523 988 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 SNRPFP62306 86 aaKnown RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 FKBP3Q00688 224 aaKnown RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 PPP2R3AQ06190 1150 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 COL19A1Q14993 1142 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 NR1I3Q14994 352 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 PTPROQ16827 1216 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 NBPF20Q3BBV1 942 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 TCP11X2Q5H9J9 407 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 FAM47CQ5HY64 1035 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 VSTM4Q8IW00 320 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 TPH2Q8IWU9 490 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 EXOC8Q8IYI6 725 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 FBXO22Q8NEZ5 403 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 EDAQ92838 391 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 CCDC43Q96MW1 224 aaKnown RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 MTG1Q9BT17 334 aaPredicted RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 NUP58Q9BVL2 599 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 HSD3B7Q9H2F3 369 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 CGNQ9P2M7 1197 aaKnown RBP18.93■□□□□ 0.62
PHGDH-234ENST00000642041 PCDHA10Q9Y5I2 948 aa18.93■□□□□ 0.62
PHGDH-234ENST00000642041 LCTP09848 1927 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 A0A1W2PQC6 194 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 E9PMD0 336 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 EIF3DO15371 548 aaKnown RBP eCLIP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 DHX15O43143 795 aaKnown RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 PSAPP07602 524 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 MYL3P08590 195 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 CD44P16070 742 aaKnown RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 RPL13P26373 211 aaKnown RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 CPT1AP50416 773 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 DNM2P50570 870 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 PTPN11Q06124 597 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 STK4Q13043 487 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 COASYQ13057 564 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 NEDD9Q14511 834 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 EDRF1Q3B7T1 1238 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 DUSP28Q4G0W2 176 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 TIGD5Q53EQ6 642 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 EEPD1Q7L9B9 569 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 DYMQ7RTS9 669 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 LRRC8AQ8IWT6 810 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 FBXO16Q8IX29 292 aaPredicted RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 SPC24Q8NBT2 197 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 IL31RAQ8NI17 732 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 GOLGA5Q8TBA6 731 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 UNC45AQ9H3U1 944 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 C17orf75Q9HAS0 396 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 VTA1Q9NP79 307 aa18.92■□□□□ 0.62
PHGDH-234ENST00000642041 LARSQ9P2J5 1176 aaKnown RBP18.92■□□□□ 0.62
PHGDH-234ENST00000642041 ARHGEF35A5YM69 484 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms