RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-222ENST00000641587 NID2Q14112 1375 aa11.27□□□□□ -0.61
PHGDH-222ENST00000641587 MAGEB2O15479 319 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 TMOD1P28289 359 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 NBL1P41271 181 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 MTHFRP42898 656 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 ASTLQ6HA08 431 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-222ENST00000641587 FAM43BQ6ZT52 329 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-222ENST00000641587 FRMD5Q7Z6J6 570 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 REXO1Q8N1G1 1221 aaKnown RBP11.26□□□□□ -0.61
PHGDH-222ENST00000641587 NLRP7Q8WX94 980 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 INTS4Q96HW7 963 aaKnown RBP11.26□□□□□ -0.61
PHGDH-222ENST00000641587 FAM167AQ96KS9 214 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 ZMYND12Q9H0C1 365 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 IRF2BPLQ9H1B7 796 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 MFSD1Q9H3U5 465 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 NRDE2Q9H7Z3 1164 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 DISC1Q9NRI5 854 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 DNAJB4Q9UDY4 337 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 DBR1Q9UK59 544 aaKnown RBP11.26□□□□□ -0.61
PHGDH-222ENST00000641587 INPP5FQ9Y2H2 1132 aa11.26□□□□□ -0.61
PHGDH-222ENST00000641587 ESYT2A0FGR8 921 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 WDR64B1ANS9 1081 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 MSH4O15457 936 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 PI15O43692 258 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 JAK2O60674 1132 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 EOMESO95936 686 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 GJB2P29033 226 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 ALDH7A1P49419 539 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 AKAP17AQ02040 695 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 SSRP1Q08945 709 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 MTERF2Q49AM1 385 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 TEX2Q8IWB9 1127 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 TRIM22Q8IYM9 498 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 ZDHHC14Q8IZN3 488 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 FAM184AQ8NB25 1140 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 NSUN7Q8NE18 718 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 FLCNQ8NFG4 579 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 SLC22A17Q8WUG5 538 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 PHKBQ93100 1093 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 LLPHQ9BRT6 129 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 SLC26A6Q9BXS9 759 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 MRPL9Q9BYD2 267 aaKnown RBP11.25□□□□□ -0.61
PHGDH-222ENST00000641587 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 GLT8D2Q9H1C3 349 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 UNC45AQ9H3U1 944 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 TBC1D13Q9NVG8 400 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 DMXL1Q9Y485 3027 aa11.25□□□□□ -0.61
PHGDH-222ENST00000641587 DNAH14Q0VDD8 3507 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 A0A087WZ62 844 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 CTDNEP1O95476 244 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 SSBP05455 408 aaKnown RBP eCLIP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 CTSAP10619 480 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 CIITAP33076 1130 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 PHKA2P46019 1235 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 SLC11A1P49279 550 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 NUBP1P53384 320 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 FOSBP53539 338 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 HMGN5P82970 282 aaKnown RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 TBC1D8BQ0IIM8 1120 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 TARBP2Q15633 366 aaKnown RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 ATAT1Q5SQI0 421 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 TWF2Q6IBS0 349 aaKnown RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 KSR1Q8IVT5 923 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 IGSF21Q96ID5 467 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 CEP89Q96ST8 783 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 FDXACB1Q9BRP7 624 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 C6orf50Q9HD87 102 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 DZANK1Q9NVP4 752 aa11.24□□□□□ -0.61
PHGDH-222ENST00000641587 ORC3Q9UBD5 711 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 SEPT9Q9UHD8 586 aaPredicted RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 PIN4Q9Y237 131 aaKnown RBP11.24□□□□□ -0.61
PHGDH-222ENST00000641587 NARSO43776 548 aaKnown RBP11.23□□□□□ -0.61
PHGDH-222ENST00000641587 GAS7O60861 476 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 STBD1O95210 358 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 GALTP07902 379 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 MYBP10242 640 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 IFNAR1P17181 557 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 NPR3P17342 541 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 AFF1P51825 1210 aaKnown RBP11.23□□□□□ -0.61
PHGDH-222ENST00000641587 PTPN14Q15678 1187 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 LRCH2Q5VUJ6 765 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 MCTP2Q6DN12 878 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
PHGDH-222ENST00000641587 CABP7Q86V35 215 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 ZNF280BQ86YH2 543 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 TMEM87AQ8NBN3 555 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 CYP26B1Q9NR63 512 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 FAM105AQ9NUU6 356 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 DACT1Q9NYF0 836 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 VPS54Q9P1Q0 977 aa11.23□□□□□ -0.61
PHGDH-222ENST00000641587 SPDYE4A6NLX3 237 aa11.22□□□□□ -0.61
PHGDH-222ENST00000641587 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
PHGDH-222ENST00000641587 OFD1O75665 1012 aa11.22□□□□□ -0.61
PHGDH-222ENST00000641587 DDHD2O94830 711 aa11.22□□□□□ -0.61
PHGDH-222ENST00000641587 CLCN5P51795 746 aa11.22□□□□□ -0.61
PHGDH-222ENST00000641587 NOMO2Q5JPE7 1267 aa11.22□□□□□ -0.61
PHGDH-222ENST00000641587 PLA2G4FQ68DD2 849 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms