RNA–Protein interactions for RNA: ENST00000640554.1

SDHD-209, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 5

Gene SDHD, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-209ENST00000640554 NOTUMQ6P988 496 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 ZNF598Q86UK7 904 aaKnown RBP15.79■□□□□ 0.12
SDHD-209ENST00000640554 SYT2Q8N9I0 419 aaPredicted RBP15.79■□□□□ 0.12
SDHD-209ENST00000640554 ASAP3Q8TDY4 903 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 DRC1Q96MC2 740 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 C17orf80Q9BSJ5 609 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 CCSER1Q9C0I3 900 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 LMAN2LQ9H0V9 348 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 MINDY3Q9H8M7 445 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 UBN1Q9NPG3 1134 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 FAM105AQ9NUU6 356 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 PRMT7Q9NVM4 692 aaPredicted RBP15.79■□□□□ 0.12
SDHD-209ENST00000640554 CLIC4Q9Y696 253 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 MTCH2Q9Y6C9 303 aa15.79■□□□□ 0.12
SDHD-209ENST00000640554 SIP14410 1827 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 LRRIQ4A6NIV6 560 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 E9PMD0 336 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 GUCY2CP25092 1073 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 HOXA11P31270 313 aaPredicted RBP15.78■□□□□ 0.12
SDHD-209ENST00000640554 GPM6BQ13491 265 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 BECN1Q14457 450 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 CDCA2Q69YH5 1023 aaPredicted RBP15.78■□□□□ 0.12
SDHD-209ENST00000640554 PPP4R3CPQ6ZMV5 832 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 MAEAQ7L5Y9 396 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 MRPL10Q7Z7H8 261 aaKnown RBP15.78■□□□□ 0.12
SDHD-209ENST00000640554 HACE1Q8IYU2 909 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 MRPL9Q9BYD2 267 aaKnown RBP15.78■□□□□ 0.12
SDHD-209ENST00000640554 MTUS1Q9ULD2 1270 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 RBM19Q9Y4C8 960 aaKnown RBP15.78■□□□□ 0.12
SDHD-209ENST00000640554 PCDHB12Q9Y5F1 795 aa15.78■□□□□ 0.12
SDHD-209ENST00000640554 CNTNAP2Q9UHC6 1331 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 EPOPA6NHQ4 379 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 TBKBP1A7MCY6 615 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 RFXAPO00287 272 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 LPXNO60711 386 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 ZSCAN22P10073 491 aaPredicted RBP15.77■□□□□ 0.12
SDHD-209ENST00000640554 SCP2P22307 547 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 CTNNB1P35222 781 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 TXLNAP40222 546 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 NASPP49321 788 aaPredicted RBP15.77■□□□□ 0.12
SDHD-209ENST00000640554 MBTD1Q05BQ5 628 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 ZRSR1Q15695 479 aaKnown RBP15.77■□□□□ 0.12
SDHD-209ENST00000640554 MAPK6Q16659 721 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 TMEM119Q4V9L6 283 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 RINT1Q6NUQ1 792 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 GLB1LQ6UWU2 654 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 C1orf186Q6ZWK4 172 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 DEPTORQ8TB45 409 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 MRPL38Q96DV4 380 aaKnown RBP15.77■□□□□ 0.12
SDHD-209ENST00000640554 PNMA5Q96PV4 448 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 FZD8Q9H461 694 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 GPRC5CQ9NQ84 441 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 CCDC39Q9UFE4 941 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 PCDHB2Q9Y5E7 798 aa15.77■□□□□ 0.12
SDHD-209ENST00000640554 MRPL42Q9Y6G3 142 aaKnown RBP15.77■□□□□ 0.12
SDHD-209ENST00000640554 TSPAN1O60635 241 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 LINC00271P0C7V0 271 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 PLA2G4BP0C869 781 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 LAG3P18627 525 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 LRRC43Q8N309 656 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 KRI1Q8N9T8 703 aaKnown RBP15.76■□□□□ 0.11
SDHD-209ENST00000640554 RNF169Q8NCN4 708 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 RASSF8Q8NHQ8 419 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 CASD1Q96PB1 797 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 USP28Q96RU2 1077 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 NTPCRQ9BSD7 190 aaKnown RBP15.76■□□□□ 0.11
SDHD-209ENST00000640554 CSRNP2Q9H175 543 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 KANSL3Q9P2N6 904 aa15.76■□□□□ 0.11
SDHD-209ENST00000640554 FBXO2Q9UK22 296 aaPredicted RBP15.76■□□□□ 0.11
SDHD-209ENST00000640554 A0A1B0GUA9 196 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 ACKR2O00590 384 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 PPP6R2O75170 966 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 YEATS4O95619 227 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 FGFR1P11362 822 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 NCLP19338 710 aaKnown RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 IBSPP21815 317 aaPredicted RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 MARCKSP29966 332 aaPredicted RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 DDIT3P35638 169 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 SMTNP53814 917 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 SLC12A3P55017 1021 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 UBE3AQ05086 875 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 DMP1Q13316 513 aaPredicted RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 STK38Q15208 465 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 AMHR2Q16671 573 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 PAN2Q504Q3 1202 aaKnown RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 SPOUT1Q5T280 376 aaKnown RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 FAM173BQ6P4H8 233 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 KCNK18Q7Z418 384 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 SPRED2Q7Z698 418 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 GDPD5Q8WTR4 605 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 TYW1Q9NV66 732 aaKnown RBP15.75■□□□□ 0.11
SDHD-209ENST00000640554 CFAP45Q9UL16 551 aa15.75■□□□□ 0.11
SDHD-209ENST00000640554 PTPRSQ13332 1948 aa15.74■□□□□ 0.11
SDHD-209ENST00000640554 H0YCG3 227 aa15.74■□□□□ 0.11
SDHD-209ENST00000640554 K7ERI5 159 aa15.74■□□□□ 0.11
SDHD-209ENST00000640554 HIP1RO75146 1068 aa15.74■□□□□ 0.11
SDHD-209ENST00000640554 F13A1P00488 732 aa15.74■□□□□ 0.11
SDHD-209ENST00000640554 SSBP05455 408 aaKnown RBP eCLIP15.74■□□□□ 0.11
SDHD-209ENST00000640554 ATF7P17544 494 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms