RNA–Protein interactions for RNA: ENST00000626109.1

LINC00538-201, long intergenic non-protein coding RNA 538, humanhuman

BASIC

Gene LINC00538, Length 1,906 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00538-201ENST00000626109 RASGRP4Q8TDF6 673 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 SPIRE2Q8WWL2 714 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 BAG1Q99933 345 aaPredicted RBP12.67□□□□□ -0.38
LINC00538-201ENST00000626109 EHMT1Q9H9B1 1298 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 PCDH10Q9P2E7 1040 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 NFE2L3Q9Y4A8 694 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 PCDHB6Q9Y5E3 794 aa12.67□□□□□ -0.38
LINC00538-201ENST00000626109 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC00538-201ENST00000626109 SLC15A5A6NIM6 579 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 POTEB2H3BUK9 544 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 COPAP53621 1224 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 GABPB1Q06547 395 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 NR5A1Q13285 461 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 PDE1CQ14123 709 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 KRT222Q8N1A0 295 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 C1orf216Q8TAB5 229 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 CTAGE1Q96RT6 745 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 ANO3Q9BYT9 981 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 TMEM260Q9NX78 707 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 DNAI1Q9UI46 699 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 PCDHA6Q9UN73 950 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 PCDHA8Q9Y5H6 950 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 M0R2N6 131 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 FKTNO75072 461 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 KATNA1O75449 491 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SLFN14P0C7P3 912 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 ADORA2AP29274 412 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 PSMC4P43686 418 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 GJA8P48165 433 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 CCDC15Q0P6D6 951 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 TBX2Q13207 712 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 TMED1Q13445 227 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 GRB14Q14449 540 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 NAA30Q147X3 362 aaPredicted RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 ELF2Q15723 593 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 ANKS3Q6ZW76 656 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 MNS1Q8NEH6 495 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SPATA20Q8TB22 786 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SOCS4Q8WXH5 440 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 CSRNP2Q9H175 543 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 CHCHD3Q9NX63 227 aaKnown RBP12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SIRPGQ9P1W8 387 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 SMCHD1A6NHR9 2005 aa12.66□□□□□ -0.38
LINC00538-201ENST00000626109 PLXNB2O15031 1838 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 ADAMTS3O15072 1205 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 TREHO43280 583 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 ACTN4O43707 911 aaKnown RBP12.65□□□□□ -0.38
LINC00538-201ENST00000626109 ZNF18P17022 549 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 ARHGEF6Q15052 776 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 NONOQ15233 471 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC00538-201ENST00000626109 C21orf62-AS1Q17RA5 79 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 KMT5BQ4FZB7 885 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 FILIP1LQ4L180 1135 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 PIK3AP1Q6ZUJ8 805 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
LINC00538-201ENST00000626109 TNFRSF25Q93038 417 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 GSDMAQ96QA5 445 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 NAA15Q9BXJ9 866 aaKnown RBP12.65□□□□□ -0.38
LINC00538-201ENST00000626109 SLC5A4Q9NY91 659 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 COL20A1Q9P218 1284 aa12.65□□□□□ -0.38
LINC00538-201ENST00000626109 ADD3Q9UEY8 706 aaKnown RBP12.65□□□□□ -0.38
LINC00538-201ENST00000626109 FOXN1O15353 648 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 KIF20AO95235 890 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 PGK2P07205 417 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 CCDC159P0C7I6 412 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 BMP6P22004 513 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ENPP1P22413 925 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ETFBP38117 255 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 SH3BGRP55822 239 aaPredicted RBP12.64□□□□□ -0.39
LINC00538-201ENST00000626109 HSD17B7P56937 341 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 FOXK1P85037 733 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 PAK2Q13177 524 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 SQSTM1Q13501 440 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ARHGEF16Q5VV41 709 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 SPATA1Q5VX52 437 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 DPP9Q86TI2 863 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 FAM133AQ8N9E0 248 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 CD99L2Q8TCZ2 262 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ZNF296Q8WUU4 475 aaPredicted RBP12.64□□□□□ -0.39
LINC00538-201ENST00000626109 TAAR1Q96RJ0 339 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 RMDN3Q96TC7 470 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 NUDT12Q9BQG2 462 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ARHGAP39Q9C0H5 1083 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ITM2BQ9Y287 266 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 PPP2R2CQ9Y2T4 447 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ZNF236Q9UL36 1845 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 DNAJC25-GNG10A0A024R161 153 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 B4DLN1 442 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 CNTN2Q02246 1040 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 ZC3H12BQ5HYM0 836 aaKnown RBP12.64□□□□□ -0.39
LINC00538-201ENST00000626109 MORN1Q5T089 497 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 CDCA2Q69YH5 1023 aaPredicted RBP12.64□□□□□ -0.39
LINC00538-201ENST00000626109 REXO1L1PQ8IX06 675 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 DNERQ8NFT8 737 aa12.64□□□□□ -0.39
LINC00538-201ENST00000626109 NSUN6Q8TEA1 469 aaKnown RBP12.64□□□□□ -0.39
LINC00538-201ENST00000626109 TRIM47Q96LD4 638 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms