RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 TXNDC9O14530 226 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 EVI5O60447 810 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 CAMTA2O94983 1202 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 NR3C1P04150 777 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 USP11P51784 963 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 CDR2Q01850 454 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 APBA1Q02410 837 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 PTK2BQ14289 1009 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 MXD4Q14582 209 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 DUOXA2Q1HG44 320 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 TSNAXIP1Q2TAA8 658 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 CHST13Q8NET6 341 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 SH3TC2Q8TF17 1288 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 PAGE5Q96GU1 130 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 RBAKQ9NYW8 714 aaPredicted RBP10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 HACD3Q9P035 362 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 PCDHB7Q9Y5E2 793 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 MYO3AQ8NEV4 1616 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 SERPING1P05155 500 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 RCAN1P53805 252 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 EPHA7Q15375 998 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 CYP4F22Q6NT55 531 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 CDC42EP5Q6NZY7 148 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 SARM1Q6SZW1 724 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 TRIM42Q8IWZ5 723 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 LRGUKQ96M69 825 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 ARHGAP23Q9P227 1491 aa10.46□□□□□ -0.74
CLTCL1-211ENST00000621271 POTECB2RU33 542 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 HSPA8P11142 646 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CYP2C9P11712 490 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CCT5P48643 541 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 SNX17Q15036 470 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 RAB42Q8N4Z0 105 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 SPZ1Q9BXG8 430 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 KLC2Q9H0B6 622 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 SIK2Q9H0K1 926 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 VCPKMTQ9H867 229 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 BARHL2Q9NY43 387 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 MAN1B1Q9UKM7 699 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NBPF26B4DH59 902 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 PGRMC1O00264 195 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 ITGA4P13612 1032 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 IFNA8P32881 189 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 HNRNPH2P55795 449 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NBPF10Q6P3W6 841 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 PDIK1LQ8N165 341 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NBPF15Q8N660 670 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CEP120Q8N960 986 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 TMEM39BQ9GZU3 492 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 AGO2Q9UKV8 859 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 FIS1Q9Y3D6 152 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 TTI1O43156 1089 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 ORC4O43929 436 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NR3C2P08235 984 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CACNB2Q08289 660 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NME3Q13232 169 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 C12orf60Q5U649 245 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 RAD54LQ92698 747 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NSUN4Q96CB9 384 aaKnown RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 PARD6BQ9BYG5 372 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 DNAJC12Q9UKB3 198 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 FAN1Q9Y2M0 1017 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CNTNAP4Q9C0A0 1308 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 PI4K2BG5E9Z4 385 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 NDUFB10O96000 172 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 IRX4P78413 519 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 CDK17Q00537 523 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 BBS9Q3SYG4 887 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 TRIM67Q6ZTA4 783 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 HAUS6Q7Z4H7 955 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 RHOT2Q8IXI1 618 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 DEPDC1BQ8WUY9 529 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 EXT2Q93063 718 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 ZNF512Q96ME7 567 aaPredicted RBP10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 SLC38A7Q9NVC3 462 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 USH1CQ9Y6N9 552 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 FLT1P17948 1338 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 MROH2AA6NES4 1674 aa10.45□□□□□ -0.74
CLTCL1-211ENST00000621271 A0A087WUV0 522 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 SLC8A1P32418 973 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 IL1RL1Q01638 556 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 GUCY2DQ02846 1103 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 ZNF235Q14590 738 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 ALX1Q15699 326 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 ARHGAP15Q53QZ3 475 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 TTC19Q6DKK2 380 aaPredicted RBP10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 SZRD1Q7Z422 152 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 KSR1Q8IVT5 923 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 SRRM1Q8IYB3 904 aaKnown RBP10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 GPD1LQ8N335 351 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 SLC35F6Q8N357 371 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 TMEM169Q96HH4 297 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 NYAP2Q9P242 653 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 A0A087WWV3 80 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 POTEFA5A3E0 1075 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 SNX2O60749 519 aa10.44□□□□□ -0.74
CLTCL1-211ENST00000621271 TJP3O95049 919 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms