RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 CLASP2O75122 1294 aaKnown RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 CDKL5O76039 1030 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 LARGE1O95461 756 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 CTDNEP1O95476 244 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 SRGAP2BP0DMP2 458 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 ALDH7A1P49419 539 aaKnown RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 ZXDAP98168 799 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 SMC1AQ14683 1233 aaKnown RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 PPP4R3AQ6IN85 833 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 TRIM67Q6ZTA4 783 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 TMEM173Q86WV6 379 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 HAS1Q92839 578 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 TMEM143Q96AN5 459 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 CEP170P1Q96L14 293 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 MFSD14AQ96MC6 490 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 FBXL18Q96ME1 805 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 TRAIPQ9BWF2 469 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 MRPL9Q9BYD2 267 aaKnown RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 BACH2Q9BYV9 841 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 INO80BQ9C086 356 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 IFT122Q9HBG6 1241 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
TARDBP-221ENST00000619555 FAM105AQ9NUU6 356 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 CDH22Q9UJ99 828 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 INPP5FQ9Y2H2 1132 aa12.5□□□□□ -0.41
TARDBP-221ENST00000619555 STK36Q9NRP7 1315 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 TMEM221A6NGB7 291 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 M0R296 226 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 ZBTB39O15060 712 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 MARCH6O60337 910 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 ZNF623O75123 536 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 ZC3H11AO75152 810 aaKnown RBP eCLIP12.49□□□□□ -0.411e-7■■□□□ 12
TARDBP-221ENST00000619555 OFD1O75665 1012 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 CXCL14O95715 111 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 P4HBP07237 508 aaKnown RBP12.49□□□□□ -0.41
TARDBP-221ENST00000619555 SRGAP2CP0DJJ0 459 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 GCFC2P16383 781 aaKnown RBP12.49□□□□□ -0.41
TARDBP-221ENST00000619555 CA8P35219 290 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 NEK4P51957 841 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 EPHA7Q15375 998 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 PRPF31Q8WWY3 499 aaKnown RBP12.49□□□□□ -0.41
TARDBP-221ENST00000619555 AUTS2Q8WXX7 1259 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 CASP10Q92851 521 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 TMEM169Q96HH4 297 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 JPH2Q9BR39 696 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-221ENST00000619555 NRDE2Q9H7Z3 1164 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 MINDY3Q9H8M7 445 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 TBC1D13Q9NVG8 400 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 RGL1Q9NZL6 768 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
TARDBP-221ENST00000619555 COL4A3BPQ9Y5P4 624 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 HCFC2Q9Y5Z7 792 aa12.49□□□□□ -0.41
TARDBP-221ENST00000619555 B4GALT3O60512 393 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 DKC1O60832 514 aaKnown RBP eCLIP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 GALTP07902 379 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 SKIP12755 728 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 FDPSP14324 419 aaKnown RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 HOXB8P17481 243 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 XBP1P17861 261 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 SP100P23497 879 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 POLGP54098 1239 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 ST3GAL1Q11201 340 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 NR5A1Q13285 461 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 CTTNQ14247 550 aaKnown RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 NOMO2Q5JPE7 1267 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 NCAPH2Q6IBW4 605 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 GLB1LQ6UWU2 654 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 ALYREFQ86V81 257 aaKnown RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 VPS52Q8N1B4 723 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 NECAB1Q8N987 351 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 BCL7CQ8WUZ0 217 aaPredicted RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 SLC7A3Q8WY07 619 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 PBXIP1Q96AQ6 731 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 DYDC2Q96IM9 177 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 TBC1D32Q96NH3 1257 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 LXNQ9BS40 222 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 GBP3Q9H0R5 595 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 DHX33Q9H6R0 707 aaKnown RBP12.48□□□□□ -0.41
TARDBP-221ENST00000619555 AGPAT5Q9NUQ2 364 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 PCDHB2Q9Y5E7 798 aa12.48□□□□□ -0.41
TARDBP-221ENST00000619555 TBX3O15119 743 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 WEE2P0C1S8 567 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 HOXA11P31270 313 aaPredicted RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 YWHABP31946 246 aaKnown RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 RFC5P40937 340 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 SLC11A1P49279 550 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 RAB27AP51159 221 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 AFF1P51825 1210 aaKnown RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 NHLH1Q02575 133 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 CYP4A11Q02928 519 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 RNASELQ05823 741 aaKnown RBP12.47□□□□□ -0.41
TARDBP-221ENST00000619555 SPIRE1Q08AE8 756 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 LAMTOR4Q0VGL1 99 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 ME3Q16798 604 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 XKR9Q5GH70 373 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 UBXN11Q5T124 520 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 KANK3Q6NY19 840 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 AGMOQ6ZNB7 445 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 BMP8AQ7Z5Y6 402 aa12.47□□□□□ -0.41
TARDBP-221ENST00000619555 SRGAP1Q7Z6B7 1085 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms