RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 BDP1A6H8Y1 2624 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 SPATA31C1P0DKV0 1188 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 MUTP22033 750 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 TECP42680 631 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 KCNT2Q6UVM3 1135 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 LRRC55Q6ZSA7 311 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 CATSPER3Q86XQ3 398 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 PGBD4Q96DM1 585 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 TMX3Q96JJ7 454 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 ZNF558Q96NG5 402 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 NACC1Q96RE7 527 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 TLR9Q9NR96 1032 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 PUF60Q9UHX1 559 aaKnown RBP20.27■□□□□ 0.84
VCX3A-203ENST00000612369 DBR1Q9UK59 544 aaKnown RBP20.27■□□□□ 0.84
VCX3A-203ENST00000612369 FAM50BQ9Y247 325 aa20.27■□□□□ 0.84
VCX3A-203ENST00000612369 GRXCR2A6NFK2 248 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 RPA1P27694 616 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 ARL2P36404 184 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 PTENP60484 403 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 PTCRAQ6ISU1 281 aaPredicted RBP20.26■□□□□ 0.83
VCX3A-203ENST00000612369 EP400NLQ6ZTU2 488 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 IFNLR1Q8IU57 520 aaPredicted RBP20.26■□□□□ 0.83
VCX3A-203ENST00000612369 HELQQ8TDG4 1101 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 PIGOQ8TEQ8 1089 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 NECAB3Q96P71 396 aaPredicted RBP20.26■□□□□ 0.83
VCX3A-203ENST00000612369 MINDY3Q9H8M7 445 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 HCSTQ9UBK5 93 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 STK24Q9Y6E0 443 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 PLXNA4Q9HCM2 1894 aa20.26■□□□□ 0.83
VCX3A-203ENST00000612369 FSD2A1L4K1 749 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 H3BQ06 376 aaPredicted RBP20.25■□□□□ 0.83
VCX3A-203ENST00000612369 AXLP30530 894 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 IRS1P35568 1242 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 LTBRP36941 435 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 FXR2P51116 673 aaKnown RBP eCLIP20.25■□□□□ 0.83
VCX3A-203ENST00000612369 KRT17Q04695 432 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 NCBP1Q09161 790 aaKnown RBP20.25■□□□□ 0.83
VCX3A-203ENST00000612369 ADAM15Q13444 863 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 HAUS3Q68CZ6 603 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 GLB1LQ6UWU2 654 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 MICAL1Q8TDZ2 1067 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 MRPS27Q92552 414 aaKnown RBP20.25■□□□□ 0.83
VCX3A-203ENST00000612369 TBC1D32Q96NH3 1257 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 NFKBIZQ9BYH8 718 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 SPG21Q9NZD8 308 aa20.25■□□□□ 0.83
VCX3A-203ENST00000612369 LAD1O00515 517 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 MED24O75448 989 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 ERLIN2O94905 339 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 HOXA11P31270 313 aaPredicted RBP20.24■□□□□ 0.83
VCX3A-203ENST00000612369 PDIA5Q14554 519 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 MRPL10Q7Z7H8 261 aaKnown RBP20.24■□□□□ 0.83
VCX3A-203ENST00000612369 EFHBQ8N7U6 833 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 C4orf32Q8N8J7 132 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 CNNM3Q8NE01 707 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 MCPH1Q8NEM0 835 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 CCDC51Q96ER9 411 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 RAB34Q9BZG1 259 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 IGFLR1Q9H665 355 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 PCDHB2Q9Y5E7 798 aa20.24■□□□□ 0.83
VCX3A-203ENST00000612369 CSPG5O95196 566 aa20.23■□□□□ 0.83
VCX3A-203ENST00000612369 ALDH7A1P49419 539 aaKnown RBP20.23■□□□□ 0.83
VCX3A-203ENST00000612369 FAM178BQ8IXR5 827 aa20.23■□□□□ 0.83
VCX3A-203ENST00000612369 CDCA3Q99618 268 aaPredicted RBP20.23■□□□□ 0.83
VCX3A-203ENST00000612369 TLE6Q9H808 572 aa20.23■□□□□ 0.83
VCX3A-203ENST00000612369 NGRNQ9NPE2 291 aaKnown RBP20.23■□□□□ 0.83
VCX3A-203ENST00000612369 CNTNAP2Q9UHC6 1331 aa20.23■□□□□ 0.83
VCX3A-203ENST00000612369 FSCN2O14926 492 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 USO1O60763 962 aaKnown RBP20.22■□□□□ 0.83
VCX3A-203ENST00000612369 OFD1O75665 1012 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 IL9P15248 144 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 GLRA2P23416 452 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 TOB1P50616 345 aaPredicted RBP20.22■□□□□ 0.83
VCX3A-203ENST00000612369 ERVFC1P60507 584 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 CAPSQ13938 189 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 NOMO2Q5JPE7 1267 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 ADGRD2Q7Z7M1 963 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 SLC39A11Q8N1S5 342 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 ASAP3Q8TDY4 903 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 LPPQ93052 612 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 UBN1Q9NPG3 1134 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 LRWD1Q9UFC0 647 aa20.22■□□□□ 0.83
VCX3A-203ENST00000612369 INO80B-WBP1J3KQ70 363 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 TSPAN1O60635 241 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 CD2BP2O95400 341 aaKnown RBP20.21■□□□□ 0.83
VCX3A-203ENST00000612369 NCLP19338 710 aaKnown RBP20.21■□□□□ 0.83
VCX3A-203ENST00000612369 GJB2P29033 226 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 GTF2F1P35269 517 aaKnown RBP eCLIP20.21■□□□□ 0.83
VCX3A-203ENST00000612369 NRIP1P48552 1158 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 BCAR1P56945 870 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 PTGDRQ13258 359 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 RILPL1Q5EBL4 403 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 UBXN11Q5T124 520 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 NOTUMQ6P988 496 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 POLR3FQ9H1D9 316 aaPredicted RBP20.21■□□□□ 0.83
VCX3A-203ENST00000612369 TBC1D13Q9NVG8 400 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 KANSL3Q9P2N6 904 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 PRKAG3Q9UGI9 489 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.21■□□□□ 0.83
VCX3A-203ENST00000612369 PCDHB6Q9Y5E3 794 aa20.21■□□□□ 0.83
VCX3A-203ENST00000612369 A0A087WWV3 80 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms