RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 NFKBIZQ9BYH8 718 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 SEMA6BQ9H3T3 888 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 TMEM134Q9H6X4 195 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 STARD7Q9NQZ5 370 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 TYW1Q9NV66 732 aaKnown RBP20.43■□□□□ 0.86
SSBP4-212ENST00000601919 TBX20Q9UMR3 447 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 NFE2L3Q9Y4A8 694 aa20.43■□□□□ 0.86
SSBP4-212ENST00000601919 CEP350Q5VT06 3117 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 A0A0U1RQG5 324 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-212ENST00000601919 A0A1W2PQ45 241 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-212ENST00000601919 A0A1W2PQY0 241 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 K7ERI5 159 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 GJB1P08034 283 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 EDRF1Q3B7T1 1238 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 CDCA2Q69YH5 1023 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-212ENST00000601919 ANKRD40Q6AI12 368 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 TTI2Q6NXR4 508 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 ZNF410Q86VK4 478 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 KIAA0319LQ8IZA0 1049 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 NLRP4Q96MN2 994 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 FAM49AQ9H0Q0 323 aaPredicted RBP20.42■□□□□ 0.86
SSBP4-212ENST00000601919 GBP3Q9H0R5 595 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 KCTD10Q9H3F6 313 aa20.42■□□□□ 0.86
SSBP4-212ENST00000601919 SIP14410 1827 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 TREHO43280 583 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 SGPL1O95470 568 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 RPL13P26373 211 aaKnown RBP20.41■□□□□ 0.86
SSBP4-212ENST00000601919 FKBP3Q00688 224 aaKnown RBP20.41■□□□□ 0.86
SSBP4-212ENST00000601919 NCAPHQ15003 741 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 FAM114A1Q8IWE2 563 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 CSGALNACT2Q8N6G5 542 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 ZBTB10Q96DT7 871 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 SCLT1Q96NL6 688 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 KIFC3Q9BVG8 833 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 TRAF3IP3Q9Y228 551 aa20.41■□□□□ 0.86
SSBP4-212ENST00000601919 TRIM49BA6NDI0 452 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 TFRCP02786 760 aaKnown RBP20.4■□□□□ 0.86
SSBP4-212ENST00000601919 VTNP04004 478 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 HOXD13P35453 343 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 PTENP60484 403 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 ZCWPW2Q504Y3 356 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 GDF6Q6KF10 455 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-212ENST00000601919 IFNLR1Q8IU57 520 aaPredicted RBP20.4■□□□□ 0.86
SSBP4-212ENST00000601919 MAP4K3Q8IVH8 894 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 KSR1Q8IVT5 923 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 ADGRA3Q8IWK6 1321 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 U2AF1L4Q8WU68 220 aaKnown RBP20.4■□□□□ 0.86
SSBP4-212ENST00000601919 NLRP7Q8WX94 980 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 CRISPLD2Q9H0B8 497 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 THAP9Q9H5L6 903 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 NOD1Q9Y239 953 aa20.4■□□□□ 0.86
SSBP4-212ENST00000601919 GRIN2DO15399 1336 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 M0QZ92 97 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 GPC3P51654 580 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 PMS1P54277 932 aaKnown RBP20.39■□□□□ 0.85
SSBP4-212ENST00000601919 ZNF200P98182 395 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-212ENST00000601919 SPAG1Q07617 926 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 HSP90AA2PQ14568 343 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-212ENST00000601919 PTGISQ16647 500 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 NFIL3Q16649 462 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 MAPK6Q16659 721 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 RUFY4Q6ZNE9 571 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 ANKRD20A12PQ8NF67 263 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 PPP1R13LQ8WUF5 828 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 DNAJB3Q8WWF6 145 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 BICD1Q96G01 975 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 CEP63Q96MT8 703 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 MED15Q96RN5 788 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 FANCLQ9NW38 375 aa20.39■□□□□ 0.85
SSBP4-212ENST00000601919 MAGEC2Q9UBF1 373 aaPredicted RBP20.39■□□□□ 0.85
SSBP4-212ENST00000601919 CETN3O15182 167 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 CDK11BP21127 795 aaKnown RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 NLRP11P59045 1033 aaKnown RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 KCNA1Q09470 495 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 MYBPC2Q14324 1141 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 HIC1Q14526 733 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 PCBP1Q15365 356 aaKnown RBP eCLIP20.38■□□□□ 0.855e-7■■■□□ 17.8
SSBP4-212ENST00000601919 SRGAP1Q7Z6B7 1085 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 SERINC5Q86VE9 423 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 ANKLE1Q8NAG6 615 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 SLC43A3Q8NBI5 491 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 DUSP9Q99956 384 aaKnown RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 TMEM106CQ9BVX2 250 aa20.38■□□□□ 0.85
SSBP4-212ENST00000601919 SRRTQ9BXP5 876 aaKnown RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 GCOM2Q9BZD3 368 aaPredicted RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 INO80BQ9C086 356 aaPredicted RBP20.38■□□□□ 0.85
SSBP4-212ENST00000601919 ZMYM2Q9UBW7 1377 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 A0A087WZ62 844 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 INO80B-WBP1J3KQ70 363 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 ARVCFO00192 962 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 HNRNPDLO14979 420 aaKnown RBP20.37■□□□□ 0.85
SSBP4-212ENST00000601919 TGFB1I1O43294 461 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 GNA14O95837 355 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 RPAINQ86UA6 219 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 ANP32BQ92688 251 aaKnown RBP20.37■□□□□ 0.85
SSBP4-212ENST00000601919 FDXACB1Q9BRP7 624 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-212ENST00000601919 MRPL4Q9BYD3 311 aaKnown RBP20.37■□□□□ 0.85
SSBP4-212ENST00000601919 AGPAT3Q9NRZ7 376 aa20.37■□□□□ 0.85
SSBP4-212ENST00000601919 PRMT7Q9NVM4 692 aaPredicted RBP20.37■□□□□ 0.85
SSBP4-212ENST00000601919 MROH7Q68CQ1 1323 aa20.36■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms