RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 MED15Q96RN5 788 aa13.99□□□□□ -0.17
ZNF548-210ENST00000600442 PCYT2Q99447 389 aa13.99□□□□□ -0.17
ZNF548-210ENST00000600442 C2orf40Q9H1Z8 148 aa13.99□□□□□ -0.17
ZNF548-210ENST00000600442 TUT1Q9H6E5 874 aaKnown RBP13.99□□□□□ -0.17
ZNF548-210ENST00000600442 RTN4Q9NQC3 1192 aaKnown RBP13.99□□□□□ -0.17
ZNF548-210ENST00000600442 PDLIM7Q9NR12 457 aa13.99□□□□□ -0.17
ZNF548-210ENST00000600442 ARMCX3Q9UH62 379 aaPredicted RBP13.99□□□□□ -0.17
ZNF548-210ENST00000600442 UNC80Q8N2C7 3258 aa13.99□□□□□ -0.17
ZNF548-210ENST00000600442 DENND3A2RUS2 1198 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 TMEM150BA6NC51 233 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 LGALS16A8MUM7 142 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 KIAA0391O15091 583 aaKnown RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 SLC16A4O15374 487 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 AP5Z1O43299 807 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 DUSP11O75319 330 aaKnown RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 MMP3P08254 477 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 ZNF865P0CJ78 1059 aaPredicted RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 GNAT1P11488 350 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 HOXD8P13378 290 aaPredicted RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 ATP4AP20648 1035 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 PSMC2P35998 433 aaKnown RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 MAN2A1Q16706 1144 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 FRMD5Q7Z6J6 570 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 VSTM4Q8IW00 320 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 DAW1Q8N136 415 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 ZNF710Q8N1W2 664 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 BICD1Q96G01 975 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 PCMTD1Q96MG8 357 aaPredicted RBP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 SH2D3AQ9BRG2 576 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 MKNK1Q9BUB5 465 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 NUP58Q9BVL2 599 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 VPS16Q9H269 839 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 SUGCTQ9HAC7 445 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 TAB2Q9NYJ8 693 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 TBX20Q9UMR3 447 aa13.98□□□□□ -0.17
ZNF548-210ENST00000600442 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.98□□□□□ -0.17
ZNF548-210ENST00000600442 LRRIQ4A6NIV6 560 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 K7ERI5 159 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 RARBP10826 455 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 KRT13P13646 458 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 SFPQP23246 707 aaKnown RBP eCLIP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 MSNP26038 577 aaKnown RBP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 CNGA1P29973 690 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 ARL2P36404 184 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 CASP5P51878 434 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 CCL14Q16627 93 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 VWA3BQ502W6 1294 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 ZC2HC1CQ53FD0 456 aaPredicted RBP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 MAP3K21Q5TCX8 1036 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 SLFN12LQ6IEE8 588 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 SLC9A9Q8IVB4 645 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 TDHQ8IZJ6 230 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 METTL13Q8N6R0 699 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 ZNF397Q8NF99 534 aaPredicted RBP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 TMEM174Q8WUU8 243 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 NAP1L5Q96NT1 182 aaPredicted RBP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 MAP7D2Q96T17 732 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 KIAA1586Q9HCI6 787 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 GPRC5CQ9NQ84 441 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 GNEQ9Y223 722 aaKnown RBP13.97□□□□□ -0.17
ZNF548-210ENST00000600442 STXBP5LQ9Y2K9 1186 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
ZNF548-210ENST00000600442 ITIH6Q6UXX5 1313 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 LCTP09848 1927 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 A0A1W2PQC6 194 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 SEPT4O43236 478 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 STX10O60499 249 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 EXOC3O60645 756 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 PPP1R37O75864 691 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 PRKAR2AP13861 404 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 MARSP56192 900 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 NCBP1Q09161 790 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 CETN1Q12798 172 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 PPFIA1Q13136 1202 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 FSCN1Q16658 493 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 PRAMEF19Q5SWL8 479 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 CEP135Q66GS9 1140 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 LRRC55Q6ZSA7 311 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 TRIM50Q86XT4 487 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 C12orf56Q8IXR9 622 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 ZC3H3Q8IXZ2 948 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 TMEM161BQ8NDZ6 487 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 GLIS3Q8NEA6 775 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 CCDC112Q8NEF3 446 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 KCNN1Q92952 543 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 TMEM143Q96AN5 459 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 STRA6Q9BX79 667 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 UBE2OQ9C0C9 1292 aaKnown RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 TMEM134Q9H6X4 195 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 POLD4Q9HCU8 107 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 AGPAT3Q9NRZ7 376 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 MTMR10Q9NXD2 777 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 FLRT1Q9NZU1 646 aa13.96□□□□□ -0.17
ZNF548-210ENST00000600442 SUCLA2Q9P2R7 463 aaPredicted RBP13.96□□□□□ -0.17
ZNF548-210ENST00000600442 LAMA2P24043 3122 aaKnown RBP13.96□□□□□ -0.18
ZNF548-210ENST00000600442 KIAA1217Q5T5P2 1943 aa13.96□□□□□ -0.18
ZNF548-210ENST00000600442 NRCAMQ92823 1304 aa13.95□□□□□ -0.18
ZNF548-210ENST00000600442 HNRNPDLO14979 420 aaKnown RBP13.95□□□□□ -0.18
ZNF548-210ENST00000600442 MSCO60682 206 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms