RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 RAD51AP2Q09MP3 1159 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 TMEM62Q0P6H9 643 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 GIT2Q14161 759 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 FAM102BQ5T8I3 360 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 KRBA2Q6ZNG9 492 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 PSPC1Q8WXF1 523 aaKnown RBP20.87■□□□□ 0.93
CCDC9-205ENST00000600117 BSNDQ8WZ55 320 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 DNAJC19Q96DA6 116 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 REEP2Q9BRK0 252 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 ADAMTS10Q9H324 1103 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 CDHR5Q9HBB8 845 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 COL4A3BPQ9Y5P4 624 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 CDY2AQ9Y6F7 541 aa20.87■□□□□ 0.93
CCDC9-205ENST00000600117 RSPH10B2B2RC85 870 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 RFXAPO00287 272 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 GPR37L1O60883 481 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 NR1I2O75469 434 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 CA3P07451 260 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 RSPH10BP0C881 870 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 GPC3P51654 580 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 CACNB1Q02641 598 aaPredicted RBP20.86■□□□□ 0.93
CCDC9-205ENST00000600117 LAMTOR4Q0VGL1 99 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 MBTPS1Q14703 1052 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 LRRC8DQ7L1W4 858 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 KSR1Q8IVT5 923 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 GRAMD1CQ8IYS0 662 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 CEP57L1Q8IYX8 460 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 DDX12PQ92771 950 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 OSBPL7Q9BZF2 842 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 TRPV2Q9Y5S1 764 aa20.86■□□□□ 0.93
CCDC9-205ENST00000600117 SCN5AQ14524 2016 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 RBAK-RBAKDNI3L0D1 243 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 IQCF3P0C7M6 154 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 NLRP11P59045 1033 aaKnown RBP20.85■□□□□ 0.93
CCDC9-205ENST00000600117 GPNMBQ14956 572 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 KIZQ2M2Z5 673 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 CNNM4Q6P4Q7 775 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 RHPN2Q8IUC4 686 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 KIFAP3Q92845 792 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 PAGE5Q96GU1 130 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 SCLYQ96I15 445 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF668Q96K58 619 aaPredicted RBP20.85■□□□□ 0.93
CCDC9-205ENST00000600117 PPP1R16BQ96T49 567 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 C7orf25Q9BPX7 421 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 CELF4Q9BZC1 486 aaKnown RBP20.85■□□□□ 0.93
CCDC9-205ENST00000600117 TRIM9Q9C026 710 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 ODF2LQ9ULJ1 636 aa20.85■□□□□ 0.93
CCDC9-205ENST00000600117 GOLGA6L22H0YM25 854 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 ASAP2O43150 1006 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 MCM4P33991 863 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 AFMP43652 599 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF131P52739 623 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 CAPSQ13938 189 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 MXD4Q14582 209 aaPredicted RBP20.84■□□□□ 0.93
CCDC9-205ENST00000600117 DYMQ7RTS9 669 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF410Q86VK4 478 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 ZNF710Q8N1W2 664 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 CNNM3Q8NE01 707 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 HLA-CQ95604 372 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 DRC1Q96MC2 740 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 C11orf16Q9NQ32 467 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 WDFY4Q6ZS81 3184 aa20.84■□□□□ 0.93
CCDC9-205ENST00000600117 MYH11P35749 1972 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 A0A087WZ62 844 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 EPOPA6NHQ4 379 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 SFI1A8K8P3 1242 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 KRT18P05783 430 aaKnown RBP20.83■□□□□ 0.93
CCDC9-205ENST00000600117 CASP1P29466 404 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 CDC42EP1Q00587 391 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 AMPD3Q01432 767 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 POU5F1BQ06416 359 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 TMEM40Q8WWA1 233 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 NLRP4Q96MN2 994 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 TIGD1Q96MW7 591 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 OSMRQ99650 979 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 FDXACB1Q9BRP7 624 aaPredicted RBP20.83■□□□□ 0.93
CCDC9-205ENST00000600117 LRRC27Q9C0I9 530 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 CERS4Q9HA82 394 aa20.83■□□□□ 0.93
CCDC9-205ENST00000600117 M0QZ92 97 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 PRR29P0C7W0 189 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 SRGAP2CP0DJJ0 459 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 CRYBB1P53674 252 aaPredicted RBP20.82■□□□□ 0.92
CCDC9-205ENST00000600117 CUL4BQ13620 913 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 FBXO47Q5MNV8 452 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 IFNLR1Q8IU57 520 aaPredicted RBP20.82■□□□□ 0.92
CCDC9-205ENST00000600117 KHSRPQ92945 711 aaKnown RBP eCLIP20.82■□□□□ 0.92
CCDC9-205ENST00000600117 SLC9A7Q96T83 725 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 BLZF1Q9H2G9 400 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 IFT122Q9HBG6 1241 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 DACT1Q9NYF0 836 aa20.82■□□□□ 0.92
CCDC9-205ENST00000600117 FRMD3A2A2Y4 597 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 NBNO60934 754 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 FAM13AO94988 1023 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 ACTN1P12814 892 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 PLS3P13797 630 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 DARSP14868 501 aaKnown RBP20.81■□□□□ 0.92
CCDC9-205ENST00000600117 NAMPTP43490 491 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 LPIN1Q14693 890 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 RNF149Q8NC42 400 aa20.81■□□□□ 0.92
CCDC9-205ENST00000600117 PHOSPHO2Q8TCD6 241 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 172.4 ms