RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 TECP42680 631 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 BCAR1P56945 870 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 POU5F1BQ06416 359 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 ERICH6BQ5W0A0 696 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 CES5AQ6NT32 575 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 TRIM67Q6ZTA4 783 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 HFE2Q6ZVN8 426 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 DDX53Q86TM3 631 aaKnown RBP15.23■□□□□ 0.03
TRIM28-211ENST00000597968 RNF169Q8NCN4 708 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 PSPC1Q8WXF1 523 aaKnown RBP15.23■□□□□ 0.03
TRIM28-211ENST00000597968 GJA10Q969M2 543 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 CEP170P1Q96L14 293 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 UBN1Q9NPG3 1134 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 AGPAT5Q9NUQ2 364 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 DZANK1Q9NVP4 752 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 PCDHGC5Q9Y5F6 944 aa15.23■□□□□ 0.03
TRIM28-211ENST00000597968 C2orf71A6NGG8 1288 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 HIDE1A8MVS5 230 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 EML1O00423 815 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 AXLP30530 894 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 YWHABP31946 246 aaKnown RBP15.22■□□□□ 0.03
TRIM28-211ENST00000597968 ZXDAP98168 799 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 SIGLEC14Q08ET2 396 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 MXD4Q14582 209 aaPredicted RBP15.22■□□□□ 0.03
TRIM28-211ENST00000597968 NOMO2Q5JPE7 1267 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 SYCE2Q6PIF2 218 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 MRPL10Q7Z7H8 261 aaKnown RBP15.22■□□□□ 0.03
TRIM28-211ENST00000597968 PPFIBP1Q86W92 1011 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 HAS1Q92839 578 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 CCDC51Q96ER9 411 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 ZBP1Q9H171 429 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 ADAM7Q9H2U9 754 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 PPP4R2Q9NY27 417 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 TPCN1Q9ULQ1 816 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 KCNJ14Q9UNX9 436 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 HCFC2Q9Y5Z7 792 aa15.22■□□□□ 0.03
TRIM28-211ENST00000597968 LYPLA2O95372 231 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 CTSAP10619 480 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 FGFR4P22455 802 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 MTHFRP42898 656 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 NUBP1P53384 320 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
TRIM28-211ENST00000597968 PIK3AP1Q6ZUJ8 805 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 URGCPQ8TCY9 931 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 IGSF21Q96ID5 467 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 ZNF668Q96K58 619 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-211ENST00000597968 RIPOR3Q96MK2 946 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 NLRP4Q96MN2 994 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 LXNQ9BS40 222 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 TMEM175Q9BSA9 504 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 TBC1D13Q9NVG8 400 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 ORC3Q9UBD5 711 aaPredicted RBP15.21■□□□□ 0.03
TRIM28-211ENST00000597968 WDFY4Q6ZS81 3184 aa15.21■□□□□ 0.03
TRIM28-211ENST00000597968 TMEM150BA6NC51 233 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 ZC3H11AO75152 810 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRIM28-211ENST00000597968 CSDE1O75534 798 aaKnown RBP15.2■□□□□ 0.02
TRIM28-211ENST00000597968 OFD1O75665 1012 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 CXCL14O95715 111 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 GALTP07902 379 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 KRT2P35908 639 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 SPIRE1Q08AE8 756 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 IFNLR1Q8IU57 520 aaPredicted RBP15.2■□□□□ 0.02
TRIM28-211ENST00000597968 VPS52Q8N1B4 723 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 TMEM87AQ8NBN3 555 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 PRPF31Q8WWY3 499 aaKnown RBP15.2■□□□□ 0.02
TRIM28-211ENST00000597968 RPGRIP1Q96KN7 1286 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 NFKBIZQ9BYH8 718 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 PCDHA12Q9UN75 941 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 USTQ9Y2C2 406 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 SSX2IPQ9Y2D8 614 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 PCDHB2Q9Y5E7 798 aa15.2■□□□□ 0.02
TRIM28-211ENST00000597968 TMEM221A6NGB7 291 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 M0R296 226 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 INPPL1O15357 1258 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 DTNBO60941 627 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 CLASP2O75122 1294 aaKnown RBP15.19■□□□□ 0.02
TRIM28-211ENST00000597968 DGAT1O75907 488 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 C1RP00736 705 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 ALDH2P05091 517 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 XRCC6P12956 609 aaKnown RBP eCLIP15.19■□□□□ 0.02
TRIM28-211ENST00000597968 NCLP19338 710 aaKnown RBP15.19■□□□□ 0.02
TRIM28-211ENST00000597968 PBX3P40426 434 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 NPEPPSP55786 919 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 RNASELQ05823 741 aaKnown RBP15.19■□□□□ 0.02
TRIM28-211ENST00000597968 LAMTOR4Q0VGL1 99 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 TFDP1Q14186 410 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 EMC2Q15006 297 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 PTPN21Q16825 1174 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 PLA2G4FQ68DD2 849 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 FERMT3Q86UX7 667 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 SUGP1Q8IWZ8 645 aaKnown RBP15.19■□□□□ 0.02
TRIM28-211ENST00000597968 UBALD2Q8IYN6 164 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 PLCD3Q8N3E9 789 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 PBXIP1Q96AQ6 731 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 FBXL18Q96ME1 805 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 MTRQ99707 1265 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 SH2D3AQ9BRG2 576 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 IRF2BPLQ9H1B7 796 aa15.19■□□□□ 0.02
TRIM28-211ENST00000597968 NRDE2Q9H7Z3 1164 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms