RNA–Protein interactions for RNA: ENST00000595974.5

TRIM28-206, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-206ENST00000595974 DDX19AQ9NUU7 478 aaKnown RBP17.99■□□□□ 0.47
TRIM28-206ENST00000595974 RNF19AQ9NV58 838 aa17.99■□□□□ 0.47
TRIM28-206ENST00000595974 KIAA1024Q9UPX6 916 aa17.99■□□□□ 0.47
TRIM28-206ENST00000595974 PP2D1A8MPX8 630 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 CYP11B2P19099 503 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 SYT1P21579 422 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 AXLP30530 894 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 SKIV2LQ15477 1246 aaKnown RBP17.98■□□□□ 0.47
TRIM28-206ENST00000595974 HSCBQ8IWL3 235 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 BHMT2Q9H2M3 363 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 GPRC5CQ9NQ84 441 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 AAASQ9NRG9 546 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 FAM105AQ9NUU6 356 aa17.98■□□□□ 0.47
TRIM28-206ENST00000595974 CUL9Q8IWT3 2517 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 VWA3AA6NCI4 1184 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 INO80B-WBP1J3KQ70 363 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 ZNF623O75123 536 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 LAG3P18627 525 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 HOXA11P31270 313 aaPredicted RBP17.97■□□□□ 0.47
TRIM28-206ENST00000595974 MBTD1Q05BQ5 628 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 CSPP1Q1MSJ5 1256 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 CLLU1OSQ5K130 101 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 SPOUT1Q5T280 376 aaKnown RBP17.97■□□□□ 0.47
TRIM28-206ENST00000595974 MAEAQ7L5Y9 396 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 KCTD17Q8N5Z5 321 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 ATXN2LQ8WWM7 1075 aaKnown RBP17.97■□□□□ 0.47
TRIM28-206ENST00000595974 CCDC51Q96ER9 411 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 CASD1Q96PB1 797 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 MMTAG2Q9BU76 263 aaKnown RBP17.97■□□□□ 0.47
TRIM28-206ENST00000595974 MRPL9Q9BYD2 267 aaKnown RBP17.97■□□□□ 0.47
TRIM28-206ENST00000595974 COG5Q9UP83 839 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 DNM3Q9UQ16 869 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 PCDHB12Q9Y5F1 795 aa17.97■□□□□ 0.47
TRIM28-206ENST00000595974 SPTBN5Q9NRC6 3674 aaKnown RBP17.96■□□□□ 0.47
TRIM28-206ENST00000595974 LRRIQ4A6NIV6 560 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 GRM6O15303 877 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 TSPAN1O60635 241 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 EYA4O95677 639 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 CDC25AP30304 524 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 NCBP1Q09161 790 aaKnown RBP17.96■□□□□ 0.47
TRIM28-206ENST00000595974 RESTQ13127 1097 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 HYIQ5T013 277 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 CDCA2Q69YH5 1023 aaPredicted RBP17.96■□□□□ 0.47
TRIM28-206ENST00000595974 NOTUMQ6P988 496 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 AK8Q96MA6 479 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 NT5C3AQ9H0P0 336 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 CWH43Q9H720 699 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 TYW1Q9NV66 732 aaKnown RBP17.96■□□□□ 0.47
TRIM28-206ENST00000595974 PLAGL2Q9UPG8 496 aa17.96■□□□□ 0.47
TRIM28-206ENST00000595974 VCANP13611 3396 aa17.96■□□□□ 0.46
TRIM28-206ENST00000595974 SLC26A4O43511 780 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 ITGB1P05556 798 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 NAMPTP43490 491 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 PPP2R5AQ15172 486 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 AMHR2Q16671 573 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 ZBTB8OSQ8IWT0 167 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 KLHL23Q8NBE8 558 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 COLGALT1Q8NBJ5 622 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 HELQQ8TDG4 1101 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 KIFAP3Q92845 792 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 PGBD4Q96DM1 585 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 C2orf40Q9H1Z8 148 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 NSUN3Q9H649 340 aaKnown RBP17.95■□□□□ 0.46
TRIM28-206ENST00000595974 FOXD4L1Q9NU39 408 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 HCSTQ9UBK5 93 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 PCDHB2Q9Y5E7 798 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 NCOR1O75376 2440 aa17.95■□□□□ 0.46
TRIM28-206ENST00000595974 TDRD15B5MCY1 1934 aaKnown RBP17.95■□□□□ 0.46
TRIM28-206ENST00000595974 XIRP2A4UGR9 3374 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 E9PMD0 336 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 MRPS5P82675 430 aaKnown RBP17.94■□□□□ 0.46
TRIM28-206ENST00000595974 UBE3AQ05086 875 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 SF3A1Q15459 793 aaKnown RBP17.94■□□□□ 0.46
TRIM28-206ENST00000595974 AAK1Q2M2I8 961 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 UBXN11Q5T124 520 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 GLB1LQ6UWU2 654 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 PPP4R3CPQ6ZMV5 832 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 CNNM3Q8NE01 707 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 CDK5RAP3Q96JB5 506 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 PRIMPOLQ96LW4 560 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 ALG13Q9NP73 1137 aaKnown RBP17.94■□□□□ 0.46
TRIM28-206ENST00000595974 PRMT7Q9NVM4 692 aaPredicted RBP17.94■□□□□ 0.46
TRIM28-206ENST00000595974 MTMR6Q9Y217 621 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 TTC28Q96AY4 2481 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 CNTNAP2Q9UHC6 1331 aa17.94■□□□□ 0.46
TRIM28-206ENST00000595974 STX6O43752 255 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 ARF4P18085 180 aaPredicted RBP17.93■□□□□ 0.46
TRIM28-206ENST00000595974 PPM1AP35813 382 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 LONP1P36776 959 aaKnown RBP17.93■□□□□ 0.46
TRIM28-206ENST00000595974 FAM187BQ17R55 369 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 TJAP1Q5JTD0 557 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 LRRC55Q6ZSA7 311 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 KCNK18Q7Z418 384 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 MRPL10Q7Z7H8 261 aaKnown RBP17.93■□□□□ 0.46
TRIM28-206ENST00000595974 THNSL1Q8IYQ7 743 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 SPPL3Q8TCT6 385 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 LPPQ93052 612 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 HLA-CQ95604 372 aa17.93■□□□□ 0.46
TRIM28-206ENST00000595974 IFT74Q96LB3 600 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms