RNA–Protein interactions for RNA: ENST00000589520.1

VPS25-203, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 3

Gene VPS25, Length 639 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-203ENST00000589520 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 ZNF862O60290 1169 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 TLR2O60603 784 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 LDHAP00338 332 aaKnown RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 CTAGE8P0CG41 777 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CETPP11597 493 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 MCM3P25205 808 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CNGA1P29973 690 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 STAT5BP51692 787 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 GTF2A2P52657 109 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CHMP4BP1P59074 171 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 RBM10P98175 930 aaKnown RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 AMPD2Q01433 879 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 MYL7Q01449 175 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CNTN2Q02246 1040 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 MLLT1Q03111 559 aaPredicted RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 BMS1Q14692 1282 aaKnown RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 PLA2G4FQ68DD2 849 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 GPAT2Q6NUI2 795 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 RSRC2Q7L4I2 434 aaKnown RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 CYFIP1Q7L576 1253 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 PLPPR4Q7Z2D5 763 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 IRF2BP2Q7Z5L9 587 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CTAGE6Q86UF2 777 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 CCDC60Q8IWA6 550 aaPredicted RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 CTAGE4Q8IX94 777 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 LMBR1Q8WVP7 490 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 SLC7A3Q8WY07 619 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 FBXL18Q96ME1 805 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 MMP19Q99542 508 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 DHX33Q9H6R0 707 aaKnown RBP11.31□□□□□ -0.6
VPS25-203ENST00000589520 AZI2Q9H6S1 392 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 BCAS3Q9H6U6 928 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 TMEM134Q9H6X4 195 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 MLXIPQ9HAP2 919 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 RBPJLQ9UBG7 517 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 RNF14Q9UBS8 474 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
VPS25-203ENST00000589520 DNAJC25-GNG10A0A024R161 153 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 ZNF263O14978 683 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 STRNO43815 780 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 FARP2O94887 1054 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 PLEKP08567 350 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 TCP1P17987 556 aaKnown RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 SOX5P35711 763 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 NAMPTP43490 491 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 GCLCP48506 637 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 POLGP54098 1239 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 CYP27A1Q02318 531 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 ITIH3Q06033 890 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 GFPT1Q06210 699 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 STRN3Q13033 797 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 MOGSQ13724 837 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 NAB2Q15742 525 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 ERCC6LQ2NKX8 1250 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 ABRAQ8N0Z2 381 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 TCP11Q8WWU5 503 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 CNKSR2Q8WXI2 1034 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 BBXQ8WY36 941 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 CLMNQ96JQ2 1002 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 MFSD14AQ96MC6 490 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 PAGR1Q9BTK6 254 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.3□□□□□ -0.6
VPS25-203ENST00000589520 LACRTQ9GZZ8 138 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 PORCNQ9H237 461 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 SIX2Q9NPC8 291 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 ARHGAP28Q9P2N2 729 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 DDX41Q9UJV9 622 aaKnown RBP11.3□□□□□ -0.6
VPS25-203ENST00000589520 DNAJC12Q9UKB3 198 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 FHOD1Q9Y613 1164 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 LOC285556D6RIA3 1793 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 PDE4DIPQ5VU43 2346 aa11.3□□□□□ -0.6
VPS25-203ENST00000589520 A0A0G2JMZ2 1700 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 PAPPA2Q9BXP8 1791 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 A0A0A6YYK5 440 aaPredicted RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 A0A0U1RQJ8 604 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 GSTTP1A0A1W2PQM5 241 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
VPS25-203ENST00000589520 MAFO75444 373 aaPredicted RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 LGR5O75473 907 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 PIGRP01833 764 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ACTN1P12814 892 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 UBA1P22314 1058 aaKnown RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 ARL2P36404 184 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ERVK-9P63128 1117 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 SP2Q02086 613 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 EMC2Q15006 297 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ELF2Q15723 593 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 EAPPQ56P03 285 aaPredicted RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 IER5Q5VY09 327 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 KRT39Q6A163 491 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 KSR1Q8IVT5 923 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 GPD1LQ8N335 351 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 GPRC5AQ8NFJ5 357 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 ATRIPQ8WXE1 791 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 TSC1Q92574 1164 aa11.29□□□□□ -0.6
VPS25-203ENST00000589520 INTS2Q9H0H0 1204 aaKnown RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 POLR3FQ9H1D9 316 aaPredicted RBP11.29□□□□□ -0.6
VPS25-203ENST00000589520 GPRC5CQ9NQ84 441 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms