RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 LMAN2LQ9H0V9 348 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 NSUN3Q9H649 340 aaKnown RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 AGPAT5Q9NUQ2 364 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 FAM105AQ9NUU6 356 aa18.47■□□□□ 0.55
SREBF1-219ENST00000580540 FNDC1Q4ZHG4 1894 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-219ENST00000580540 SKIP12755 728 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 ATF7P17544 494 aaPredicted RBP18.46■□□□□ 0.55
SREBF1-219ENST00000580540 GLRA2P23416 452 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 CDC25AP30304 524 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 PTENP60484 403 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 NCBP1Q09161 790 aaKnown RBP18.46■□□□□ 0.55
SREBF1-219ENST00000580540 CAPSQ13938 189 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 IL17AQ16552 155 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 NAALADL2Q58DX5 795 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 KRT79Q5XKE5 535 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 COLGALT1Q8NBJ5 622 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 MCPH1Q8NEM0 835 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 SPPL3Q8TCT6 385 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 DDX19AQ9NUU7 478 aaKnown RBP18.46■□□□□ 0.55
SREBF1-219ENST00000580540 STK24Q9Y6E0 443 aa18.46■□□□□ 0.55
SREBF1-219ENST00000580540 KIAA1671Q9BY89 1806 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 LRRIQ4A6NIV6 560 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 LAG3P18627 525 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 PRPHP41219 470 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 RAB27AP51159 221 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 KCNQ1P51787 676 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 LRRC55Q6ZSA7 311 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 LRRC43Q8N309 656 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 IGSF22Q8N9C0 903 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 MICAL1Q8TDZ2 1067 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 POF1BQ8WVV4 589 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 CPB2Q96IY4 423 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 BHMT2Q9H2M3 363 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 IGFLR1Q9H665 355 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 CWH43Q9H720 699 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 POLD4Q9HCU8 107 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 INPP5FQ9Y2H2 1132 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 PCDHB2Q9Y5E7 798 aa18.45■□□□□ 0.54
SREBF1-219ENST00000580540 VWA3AA6NCI4 1184 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 PDCP20941 246 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 MUTP22033 750 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 DNAJB1P25685 340 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 ATP2C1P98194 919 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-219ENST00000580540 PGBD4Q96DM1 585 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 TRAIPQ9BWF2 469 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 UBE2ZQ9H832 354 aaPredicted RBP18.44■□□□□ 0.54
SREBF1-219ENST00000580540 REV3LO60673 3130 aa18.44■□□□□ 0.54
SREBF1-219ENST00000580540 MEIS3P2A8K0S8 358 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 E9PMD0 336 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 TSPAN1O60635 241 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 FGF18O76093 207 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 CYP11B2P19099 503 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 KCNA5P22460 613 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 HOXA11P31270 313 aaPredicted RBP18.43■□□□□ 0.54
SREBF1-219ENST00000580540 PBX3P40426 434 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 MBTD1Q05BQ5 628 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 CAMK1Q14012 370 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 KCNT2Q6UVM3 1135 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 GLB1LQ6UWU2 654 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 ZNF558Q96NG5 402 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 MRPL9Q9BYD2 267 aaKnown RBP18.43■□□□□ 0.54
SREBF1-219ENST00000580540 DNM3Q9UQ16 869 aa18.43■□□□□ 0.54
SREBF1-219ENST00000580540 K7ELQ4 463 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-219ENST00000580540 ZNF623O75123 536 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 LIG1P18858 919 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 IRS1P35568 1242 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 RNASELQ05823 741 aaKnown RBP18.42■□□□□ 0.54
SREBF1-219ENST00000580540 POU5F1BQ06416 359 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 CSPP1Q1MSJ5 1256 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 TMEM132AQ24JP5 1023 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 UBXN11Q5T124 520 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 NOTUMQ6P988 496 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 BRAPQ7Z569 592 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 IFNLR1Q8IU57 520 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-219ENST00000580540 ZBTB8OSQ8IWT0 167 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 ADAMTS19Q8TE59 1207 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 PLIN2Q99541 437 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 GBP3Q9H0R5 595 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 CLDND1Q9NY35 253 aa18.42■□□□□ 0.54
SREBF1-219ENST00000580540 TCF20Q9UGU0 1960 aaKnown RBP18.42■□□□□ 0.54
SREBF1-219ENST00000580540 B4GALT5O43286 388 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 BMP1P13497 986 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 AXLP30530 894 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 PCBP1Q15365 356 aaKnown RBP eCLIP18.41■□□□□ 0.546e-9■■■■■ 51
SREBF1-219ENST00000580540 NOMO2Q5JPE7 1267 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 CDR2LQ86X02 465 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-219ENST00000580540 DEPTORQ8TB45 409 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 BSNDQ8WZ55 320 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 PPP2R3CQ969Q6 453 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 CDK5RAP3Q96JB5 506 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 APOL6Q9BWW8 343 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 EIF2AQ9BY44 585 aaKnown RBP18.41■□□□□ 0.54
SREBF1-219ENST00000580540 TRIM6Q9C030 488 aaPredicted RBP18.41■□□□□ 0.54
SREBF1-219ENST00000580540 PUF60Q9UHX1 559 aaKnown RBP18.41■□□□□ 0.54
SREBF1-219ENST00000580540 PCDHGC5Q9Y5F6 944 aa18.41■□□□□ 0.54
SREBF1-219ENST00000580540 BRWD1Q9NSI6 2320 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 NT5C1B-RDH14C9J2C7 533 aa18.4■□□□□ 0.54
SREBF1-219ENST00000580540 H3BQ06 376 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-219ENST00000580540 ZC3H11AO75152 810 aaKnown RBP eCLIP18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms