RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 TARBP2Q15633 366 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 ECM1Q16610 540 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 FAM160B1Q5W0V3 765 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 PLA2G4FQ68DD2 849 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TRIM46Q7Z4K8 759 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SLFN12Q8IYM2 578 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TSEN2Q8NCE0 465 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 HSD17B14Q9BPX1 270 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 EIF2AK1Q9BQI3 630 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 SEZ6LQ9BYH1 1024 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 AAASQ9NRG9 546 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TUBE1Q9UJT0 475 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 NOL7Q9UMY1 257 aaKnown RBP10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 CLIC4Q9Y696 253 aa10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TRIP12Q14669 1992 aaPredicted RBP10.62□□□□□ -0.71
NPLOC4-219ENST00000576713 TRIOBPQ9H2D6 2365 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 ST8SIA5O15466 376 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 NBNO60934 754 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 CTSHP09668 335 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 IQCF3P0C7M6 154 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 BMP1P13497 986 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 CDC25AP30304 524 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 SLC26A2P50443 739 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 NPEPPSP55786 919 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 ATP2C1P98194 919 aaPredicted RBP10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 MGAT3Q09327 533 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 TMEM62Q0P6H9 643 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 DRP2Q13474 957 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 EPHA7Q15375 998 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 SHHQ15465 462 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 SWI5Q1ZZU3 235 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 RILPL1Q5EBL4 403 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 MTHFD1LQ6UB35 978 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 CKAP2LQ8IYA6 745 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 LINC01465Q8N7H1 131 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 RDM1Q8NG50 284 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 DNAJB3Q8WWF6 145 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.61□□□□□ -0.712e-18■■■□□ 17.4
NPLOC4-219ENST00000576713 LXNQ9BS40 222 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 MMTAG2Q9BU76 263 aaKnown RBP10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 PRKAG2Q9UGJ0 569 aa10.61□□□□□ -0.71
NPLOC4-219ENST00000576713 SOX1O00570 391 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 MARCH6O60337 910 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 HBP1O60381 514 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 BAG4O95429 457 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 CHRNA1P02708 482 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 P4HBP07237 508 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 BMP2P12643 396 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 SELPP16109 830 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 PDCP20941 246 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 KLRC1P26715 233 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 THPOP40225 353 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 QARSP47897 775 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 SMTNP53814 917 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 EPHA4P54764 986 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 FPGSQ05932 587 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 ORC2Q13416 577 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 PTPAQ15257 358 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 SF3A1Q15459 793 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 FOXD4L6Q3SYB3 417 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 MTERF2Q49AM1 385 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 TMEM240Q5SV17 173 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 FAM109BQ6ICB4 259 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 FOXD4L3Q6VB84 417 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 LRRC8DQ7L1W4 858 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 BRAPQ7Z569 592 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 DEFB128Q7Z7B8 93 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 CATSPER3Q86XQ3 398 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 TDHQ8IZJ6 230 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 LRRC71Q8N4P6 559 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 IGSF22Q8N9C0 903 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 LRRC15Q8TF66 581 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 USP28Q96RU2 1077 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 INSM2Q96T92 566 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 LBHD1Q9BQE6 289 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 UBE2OQ9C0C9 1292 aaKnown RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 FAM49AQ9H0Q0 323 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 CXXC1Q9P0U4 656 aaPredicted RBP10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 TCEAL9Q9UHQ7 104 aa10.6□□□□□ -0.71
NPLOC4-219ENST00000576713 ARID2Q68CP9 1835 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 ZSCAN22P10073 491 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 DDIT3P35638 169 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 CLCN3P51790 818 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 PSMC5P62195 406 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 CENPCQ03188 943 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 CEBPZQ03701 1054 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 LRIT3Q3SXY7 679 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 ZNF484Q5JVG2 852 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 ZNF365Q70YC5 407 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 KCNK18Q7Z418 384 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 TPH2Q8IWU9 490 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 KIAA0319LQ8IZA0 1049 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 CAGE1Q8TC20 777 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 PIGOQ8TEQ8 1089 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 CLP1Q92989 425 aaKnown RBP10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 ZNF668Q96K58 619 aaPredicted RBP10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 PPP1R16BQ96T49 567 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 HINFPQ9BQA5 517 aa10.59□□□□□ -0.71
NPLOC4-219ENST00000576713 TRAIPQ9BWF2 469 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 106.7 ms