RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 SKIP12755 728 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 MCM7P33993 719 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 LTBRP36941 435 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 PHKA2P46019 1235 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 RAB27AP51159 221 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 KRT17Q04695 432 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 DLX2Q07687 328 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 SPIRE1Q08AE8 756 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 ST3GAL1Q11201 340 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 COL19A1Q14993 1142 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 CTC1Q2NKJ3 1217 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 CLLU1OSQ5K130 101 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 KCNT2Q6UVM3 1135 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 ZNF579Q8NAF0 562 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 MRPS27Q92552 414 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 LPPQ93052 612 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 ZSCAN31Q96LW9 406 aaPredicted RBP10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 DHX33Q9H6R0 707 aaKnown RBP10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 RNF19AQ9NV58 838 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 INPP5FQ9Y2H2 1132 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 MYH11P35749 1972 aa10.77□□□□□ -0.69
NPLOC4-216ENST00000574344 FSD2A1L4K1 749 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 POTEMA6NI47 508 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 WNT7AO00755 349 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 PER2O15055 1255 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 ZBTB39O15060 712 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 MBTPS2O43462 519 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 SRGAP2BP0DMP2 458 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 ATF7P17544 494 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 COL9A1P20849 921 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 HMGN5P82970 282 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 RNASELQ05823 741 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 LAMTOR4Q0VGL1 99 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 ADAM15Q13444 863 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 SMAD4Q13485 552 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 GLB1LQ6UWU2 654 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 LRRC55Q6ZSA7 311 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 TMC7Q7Z402 723 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 SRGAP1Q7Z6B7 1085 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 ZNF598Q86UK7 904 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 EFHBQ8N7U6 833 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 RNF149Q8NC42 400 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 TCF25Q9BQ70 676 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 GBP3Q9H0R5 595 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 SH2B1Q9NRF2 756 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 AGPAT5Q9NUQ2 364 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 FAM105AQ9NUU6 356 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 SPG21Q9NZD8 308 aa10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 BARX2Q9UMQ3 279 aaPredicted RBP10.76□□□□□ -0.69
NPLOC4-216ENST00000574344 NT5C1B-RDH14C9J2C7 533 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 ASAP2O43150 1006 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 USO1O60763 962 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 SLITRK3O94933 977 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 ALDH7A1P49419 539 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 ERVFC1P60507 584 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 PLCB3Q01970 1234 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 TFDP1Q14186 410 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 PDE12Q6L8Q7 609 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 LLGL2Q6P1M3 1020 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 FERMT3Q86UX7 667 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 ADHFE1Q8IWW8 467 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 TMEM87AQ8NBN3 555 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 URGCPQ8TCY9 931 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 KHSRPQ92945 711 aaKnown RBP eCLIP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 PGBD4Q96DM1 585 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 TMEM169Q96HH4 297 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 POP1Q99575 1024 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 CDCA3Q99618 268 aaPredicted RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 LLPHQ9BRT6 129 aaKnown RBP10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 IFT122Q9HBG6 1241 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 CD320Q9NPF0 282 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 PRKAG3Q9UGI9 489 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 LZTS1Q9Y250 596 aa10.75□□□□□ -0.69
NPLOC4-216ENST00000574344 FAM86C2PA6NEL3 165 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 DGAT1O75907 488 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 CD2BP2O95400 341 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 GLP2RO95838 553 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 OR52Z1P0C646 297 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 DDIT3P35638 169 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 DEKP35659 375 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 BCAR1P56945 870 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 ZP2Q05996 745 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 NCBP1Q09161 790 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 MXD4Q14582 209 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 SMC1AQ14683 1233 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 BMS1Q14692 1282 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 SMAD2Q15796 467 aaKnown RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 DUSP6Q16828 381 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 NOMO2Q5JPE7 1267 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 TMEM31Q5JXX7 168 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 SLC39A11Q8N1S5 342 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 ERMNQ8TAM6 284 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 PIGOQ8TEQ8 1089 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 RSPH1Q8WYR4 309 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 FAM193BQ96PV7 902 aaPredicted RBP10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 TMEM60Q9H2L4 133 aa10.74□□□□□ -0.69
NPLOC4-216ENST00000574344 FOXP1Q9H334 677 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms