RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SMAD4Q13485 552 aaKnown RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 MTMR3Q13615 1198 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 NTRK3Q16288 839 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PTGISQ16647 500 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 GDF6Q6KF10 455 aaPredicted RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 APOA5Q6Q788 366 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 NFXL1Q6ZNB6 911 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 ADGRD2Q7Z7M1 963 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 SGMS1Q86VZ5 419 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 IQCA1Q86XH1 822 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF654Q8IZM8 581 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 SIX5Q8N196 739 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 FBXL16Q8N461 479 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 FANCBQ8NB91 859 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 TBC1D5Q92609 795 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 DHX38Q92620 1227 aaKnown RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 WNT8BQ93098 351 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 TMEM87BQ96K49 555 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 AIFM3Q96NN9 605 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 CTAGE1Q96RT6 745 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 POP1Q99575 1024 aaKnown RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 UBAC1Q9BSL1 405 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 MKNK1Q9BUB5 465 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 KAT14Q9H8E8 782 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF287Q9HBT7 754 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 GJB4Q9NTQ9 266 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 CDH22Q9UJ99 828 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 RBM19Q9Y4C8 960 aaKnown RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 INSL6Q9Y581 213 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 CTDP1Q9Y5B0 961 aaPredicted RBP7.08□□□□□ -1.28
UBFD1-204ENST00000565634 DOCK8Q8NF50 2099 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 KIAA1671Q9BY89 1806 aa7.08□□□□□ -1.28
UBFD1-204ENST00000565634 PLXNA4Q9HCM2 1894 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ADARB2-AS1A8MUL3 147 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 SIN3BO75182 1162 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 SPATA31C1P0DKV0 1188 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 BMP3P12645 472 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 FDPSP14324 419 aaKnown RBP7.07□□□□□ -1.28
UBFD1-204ENST00000565634 GATA4P43694 442 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 NDUFV1P49821 464 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF543Q08ER8 600 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ADAM15Q13444 863 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 BFSP2Q13515 415 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 IKBKEQ14164 716 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 MBTPS1Q14703 1052 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 GRM4Q14833 912 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 RABEP1Q15276 862 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 PKN1Q16512 942 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ECM1Q16610 540 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 RSPO4Q2I0M5 234 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-204ENST00000565634 TIGD5Q53EQ6 642 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 IQSEC1Q6DN90 963 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 CNKSR3Q6P9H4 555 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 MICU3Q86XE3 530 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 TRIM50Q86XT4 487 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ADGRF4Q8IZF3 695 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 GMCL1P1Q8NEA9 526 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 DBF4BQ8NFT6 615 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 TPCN2Q8NHX9 752 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 PHKBQ93100 1093 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 TMX3Q96JJ7 454 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 HINFPQ9BQA5 517 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 SLF1Q9BQI6 1058 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 MTG1Q9BT17 334 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-204ENST00000565634 TEX13BQ9BXU2 312 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 IRF2BPLQ9H1B7 796 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 JMJD4Q9H9V9 463 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 CLEC1BQ9P126 229 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 BARX2Q9UMQ3 279 aaPredicted RBP7.07□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF232Q9UNY5 417 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 R4GN57 208 aa7.07□□□□□ -1.28
UBFD1-204ENST00000565634 OTOGLQ3ZCN5 2332 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 WDR19Q8NEZ3 1342 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ABHD14A-ACY1A0A1B0GW23 586 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 SERTM1A2A2V5 107 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 CCDC69A6NI79 296 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 KLRF2D3W0D1 207 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 PER2O15055 1255 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ZBTB43O43298 467 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ICMTO60725 284 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 PFKFB2O60825 505 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ZBED4O75132 1171 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 HMGB1P09429 215 aaKnown RBP7.06□□□□□ -1.28
UBFD1-204ENST00000565634 CKBP12277 381 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 SELPP16109 830 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ALAS2P22557 587 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 CTNNB1P35222 781 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 SLC1A4P43007 532 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 PUM1Q14671 1186 aaKnown RBP eCLIP7.06□□□□□ -1.28
UBFD1-204ENST00000565634 COL19A1Q14993 1142 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 MUM1L1Q5H9M0 696 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF618Q5T7W0 954 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 C8orf86Q6ZUL3 223 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 LRRC8DQ7L1W4 858 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 CCDC83Q8IWF9 413 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 OR6J1Q8NGC5 347 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ZNF274Q96GC6 653 aaPredicted RBP7.06□□□□□ -1.28
UBFD1-204ENST00000565634 PIGSQ96S52 555 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 YME1L1Q96TA2 773 aa7.06□□□□□ -1.28
UBFD1-204ENST00000565634 ALG1Q9BT22 464 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms