RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 MAFO75444 373 aaPredicted RBP23.43■■□□□ 1.34
HERC2-204ENST00000563945 MOXD1Q6UVY6 613 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 URGCPQ8TCY9 931 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 ATOH1Q92858 354 aaPredicted RBP23.43■■□□□ 1.34
HERC2-204ENST00000563945 PHOX2BQ99453 314 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 FAM105AQ9NUU6 356 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 CYP46A1Q9Y6A2 500 aa23.43■■□□□ 1.34
HERC2-204ENST00000563945 VCPP55072 806 aaKnown RBP23.42■■□□□ 1.34
HERC2-204ENST00000563945 TCF15Q12870 199 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 KRT25Q7Z3Z0 450 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 DDX53Q86TM3 631 aaKnown RBP23.42■■□□□ 1.34
HERC2-204ENST00000563945 PPFIBP1Q86W92 1011 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 FAM177A1Q8N128 213 aaPredicted RBP23.42■■□□□ 1.34
HERC2-204ENST00000563945 PLCD3Q8N3E9 789 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 TDRD5Q8NAT2 981 aaKnown RBP23.42■■□□□ 1.34
HERC2-204ENST00000563945 SLC7A3Q8WY07 619 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 IGSF21Q96ID5 467 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 FAM193BQ96PV7 902 aaPredicted RBP23.42■■□□□ 1.34
HERC2-204ENST00000563945 ZBP1Q9H171 429 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 TBC1D13Q9NVG8 400 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 STK39Q9UEW8 545 aa23.42■■□□□ 1.34
HERC2-204ENST00000563945 C2CD4DB7Z1M9 353 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 GALTP07902 379 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 CTSAP10619 480 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 LETM2Q2VYF4 491 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 CABP7Q86V35 215 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 C12orf76Q8N812 135 aaPredicted RBP23.41■■□□□ 1.34
HERC2-204ENST00000563945 AUTS2Q8WXX7 1259 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 ZNF274Q96GC6 653 aaPredicted RBP23.41■■□□□ 1.34
HERC2-204ENST00000563945 NRDE2Q9H7Z3 1164 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 CDH22Q9UJ99 828 aa23.41■■□□□ 1.34
HERC2-204ENST00000563945 ZNF623O75123 536 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 OFD1O75665 1012 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 STBD1O95210 358 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 WEE2P0C1S8 567 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 QARSP47897 775 aaKnown RBP23.4■■□□□ 1.34
HERC2-204ENST00000563945 NUBP1P53384 320 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 INF2Q27J81 1249 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 KSR1Q8IVT5 923 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 DAGLBQ8NCG7 672 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 ETNPPLQ8TBG4 499 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 CEP89Q96ST8 783 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 EMILIN2Q9BXX0 1053 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 CYP26B1Q9NR63 512 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 IRAK3Q9Y616 596 aa23.4■■□□□ 1.34
HERC2-204ENST00000563945 CCDC194A0A1B0GVG4 234 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 ST18O60284 1047 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 ALDH2P05091 517 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 XBP1P17861 261 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 STK3Q13188 491 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 TOB2Q14106 344 aaPredicted RBP23.39■■□□□ 1.33
HERC2-204ENST00000563945 PLA2G4FQ68DD2 849 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 KIAA1841Q6NSI8 718 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 B3GNT9Q6UX72 402 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 ANO5Q75V66 913 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 ACSF2Q96CM8 615 aaPredicted RBP23.39■■□□□ 1.33
HERC2-204ENST00000563945 CEP170P1Q96L14 293 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 ZSWIM6Q9HCJ5 1215 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 KANSL3Q9P2N6 904 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 PCDHB2Q9Y5E7 798 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 COL4A3BPQ9Y5P4 624 aa23.39■■□□□ 1.33
HERC2-204ENST00000563945 SRGAP2CP0DJJ0 459 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 EPCAMP16422 314 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 KLRC2P26717 231 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 SRGAP1Q7Z6B7 1085 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 TMEM173Q86WV6 379 aaPredicted RBP23.38■■□□□ 1.33
HERC2-204ENST00000563945 ZDHHC14Q8IZN3 488 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 PSPC1Q8WXF1 523 aaKnown RBP23.38■■□□□ 1.33
HERC2-204ENST00000563945 FAM20AQ96MK3 541 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 MBOAT7Q96N66 472 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 MFSD1Q9H3U5 465 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 FAM86C1Q9NVL1 165 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 LIMD1Q9UGP4 676 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 USTQ9Y2C2 406 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 PPME1Q9Y570 386 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 WDFY4Q6ZS81 3184 aa23.38■■□□□ 1.33
HERC2-204ENST00000563945 MYO10Q9HD67 2058 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 CDKL5O76039 1030 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 BRD1O95696 1058 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 PDGFBP01127 241 aaPredicted RBP23.37■■□□□ 1.33
HERC2-204ENST00000563945 P4HBP07237 508 aaKnown RBP23.37■■□□□ 1.33
HERC2-204ENST00000563945 SLC11A1P49279 550 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 TMC5Q6UXY8 1006 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 OTUD6AQ7L8S5 288 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 NAP1L4Q99733 375 aaKnown RBP23.37■■□□□ 1.33
HERC2-204ENST00000563945 LARP6Q9BRS8 491 aaKnown RBP23.37■■□□□ 1.33
HERC2-204ENST00000563945 RSAD1Q9HA92 442 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 DNAJB4Q9UDY4 337 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 FAN1Q9Y2M0 1017 aa23.37■■□□□ 1.33
HERC2-204ENST00000563945 H0Y858 1186 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 M0R2N6 131 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 EPB41L2O43491 1005 aaKnown RBP23.36■■□□□ 1.33
HERC2-204ENST00000563945 SSBP05455 408 aaKnown RBP eCLIP23.36■■□□□ 1.33
HERC2-204ENST00000563945 GCFC2P16383 781 aaKnown RBP23.36■■□□□ 1.33
HERC2-204ENST00000563945 RFC5P40937 340 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 NPEPPSP55786 919 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 NCBP1Q09161 790 aaKnown RBP23.36■■□□□ 1.33
HERC2-204ENST00000563945 KANK3Q6NY19 840 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 NEK8Q86SG6 692 aa23.36■■□□□ 1.33
HERC2-204ENST00000563945 SLC22A17Q8WUG5 538 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms