RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 PKP1Q13835 747 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 SF3A1Q15459 793 aaKnown RBP17.46■□□□□ 0.39
USB1-208ENST00000563207 NAALADL2Q58DX5 795 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 XKR3Q5GH77 459 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 THNSL1Q8IYQ7 743 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 MICAL1Q8TDZ2 1067 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 MSLNLQ96KJ4 702 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 SCLT1Q96NL6 688 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 ELAC1Q9H777 363 aaKnown RBP17.46■□□□□ 0.39
USB1-208ENST00000563207 BMP2KQ9NSY1 1161 aaPredicted RBP17.46■□□□□ 0.39
USB1-208ENST00000563207 PCDHB12Q9Y5F1 795 aa17.46■□□□□ 0.39
USB1-208ENST00000563207 C19orf67A6NJJ6 358 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 MEIS3P2A8K0S8 358 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 MAFO75444 373 aaPredicted RBP17.45■□□□□ 0.38
USB1-208ENST00000563207 TECP42680 631 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 NDUFV1P49821 464 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 SMAD2Q15796 467 aaKnown RBP17.45■□□□□ 0.38
USB1-208ENST00000563207 PUS10Q3MIT2 529 aaKnown RBP17.45■□□□□ 0.38
USB1-208ENST00000563207 TMEM31Q5JXX7 168 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 ODR4Q5SWX8 454 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 NCAPH2Q6IBW4 605 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 ZNF598Q86UK7 904 aaKnown RBP17.45■□□□□ 0.38
USB1-208ENST00000563207 RHPN2Q8IUC4 686 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 ERMNQ8TAM6 284 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 HELQQ8TDG4 1101 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 LPPQ93052 612 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 RGL1Q9NZL6 768 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 SUCLA2Q9P2R7 463 aaPredicted RBP17.45■□□□□ 0.38
USB1-208ENST00000563207 CD207Q9UJ71 328 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 CFAP45Q9UL16 551 aa17.45■□□□□ 0.38
USB1-208ENST00000563207 ZSCAN20P17040 1043 aaPredicted RBP17.44■□□□□ 0.38
USB1-208ENST00000563207 MUTP22033 750 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 QARSP47897 775 aaKnown RBP17.44■□□□□ 0.38
USB1-208ENST00000563207 NASPP49321 788 aaPredicted RBP17.44■□□□□ 0.38
USB1-208ENST00000563207 PSMC5P62195 406 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 FAM173BQ6P4H8 233 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 ADHFE1Q8IWW8 467 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 EFHBQ8N7U6 833 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 IGSF22Q8N9C0 903 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 TMEM117Q9H0C3 514 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 TLE6Q9H808 572 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 TLR9Q9NR96 1032 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 ZDHHC9Q9Y397 364 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 CLIC4Q9Y696 253 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 ARID2Q68CP9 1835 aa17.44■□□□□ 0.38
USB1-208ENST00000563207 A0A087WWV3 80 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 A0A0U1RQF3 1178 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 HIDE1A8MVS5 230 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 NT5C1B-RDH14C9J2C7 533 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 FSCN2O14926 492 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 NCK2O43639 380 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 GPR37L1O60883 481 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 YEATS4O95619 227 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 CTTNQ14247 550 aaKnown RBP17.43■□□□□ 0.38
USB1-208ENST00000563207 SLC39A14Q15043 492 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 PTPAQ15257 358 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 FOXD4L5Q5VV16 416 aaPredicted RBP17.43■□□□□ 0.38
USB1-208ENST00000563207 PLPP4Q5VZY2 271 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 KCNT2Q6UVM3 1135 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 FOXD4L4Q8WXT5 416 aaPredicted RBP17.43■□□□□ 0.38
USB1-208ENST00000563207 TMEM143Q96AN5 459 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 DYDC2Q96IM9 177 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 AK8Q96MA6 479 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 NLRP4Q96MN2 994 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 USP28Q96RU2 1077 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 HSD17B14Q9BPX1 270 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 ZSWIM4Q9H7M6 989 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 CYP26B1Q9NR63 512 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 LRWD1Q9UFC0 647 aa17.43■□□□□ 0.38
USB1-208ENST00000563207 POTEMA6NI47 508 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 CYP4A11Q02928 519 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 SMAD4Q13485 552 aaKnown RBP17.42■□□□□ 0.38
USB1-208ENST00000563207 C4orf19Q8IY42 314 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 EIF2AK1Q9BQI3 630 aaKnown RBP17.42■□□□□ 0.38
USB1-208ENST00000563207 POLR3CQ9BUI4 534 aaPredicted RBP17.42■□□□□ 0.38
USB1-208ENST00000563207 APOL5Q9BWW9 433 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 GCOM2Q9BZD3 368 aaPredicted RBP17.42■□□□□ 0.38
USB1-208ENST00000563207 MINDY3Q9H8M7 445 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 IFT122Q9HBG6 1241 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 TUFT1Q9NNX1 390 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 AAASQ9NRG9 546 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 CDH22Q9UJ99 828 aa17.42■□□□□ 0.38
USB1-208ENST00000563207 TCHHQ07283 1943 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 SLC26A4O43511 780 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 B4GALT3O60512 393 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 SLITRK3O94933 977 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 LYPLA2O95372 231 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 EYA4O95677 639 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 LAG3P18627 525 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 RPA1P27694 616 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 LONP1P36776 959 aaKnown RBP17.41■□□□□ 0.38
USB1-208ENST00000563207 DUSP6Q16828 381 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 TMEM173Q86WV6 379 aaPredicted RBP17.41■□□□□ 0.38
USB1-208ENST00000563207 KCTD17Q8N5Z5 321 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 LINC00301Q8NCQ3 95 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 MRPS27Q92552 414 aaKnown RBP17.41■□□□□ 0.38
USB1-208ENST00000563207 IPO9Q96P70 1041 aaKnown RBP17.41■□□□□ 0.38
USB1-208ENST00000563207 LXNQ9BS40 222 aa17.41■□□□□ 0.38
USB1-208ENST00000563207 PPME1Q9Y570 386 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms