RNA–Protein interactions for RNA: ENST00000562722.1

SF3B3-202, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-202ENST00000562722 DZANK1Q9NVP4 752 aa14.56□□□□□ -0.08
SF3B3-202ENST00000562722 IGKV6-21A0A0C4DH24 114 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 CARNS1A5YM72 827 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 C2CD4DB7Z1M9 353 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 SLC37A4O43826 429 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 DKC1O60832 514 aaKnown RBP eCLIP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 STBD1O95210 358 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 MTHFRP42898 656 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 POLGP54098 1239 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 VCPP55072 806 aaKnown RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 MTMR3Q13615 1198 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 MOXD1Q6UVY6 613 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 ANO5Q75V66 913 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 TMEM173Q86WV6 379 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 C12orf76Q8N812 135 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 TDRD5Q8NAT2 981 aaKnown RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 DAGLBQ8NCG7 672 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 URGCPQ8TCY9 931 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 PGBD4Q96DM1 585 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 ZNF274Q96GC6 653 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 IGSF21Q96ID5 467 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 CEP170P1Q96L14 293 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 ZBP1Q9H171 429 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 BMP2KQ9NSY1 1161 aaPredicted RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 DBR1Q9UK59 544 aaKnown RBP14.55□□□□□ -0.08
SF3B3-202ENST00000562722 KCNJ14Q9UNX9 436 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 COL4A3BPQ9Y5P4 624 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 ZNF318Q5VUA4 2279 aa14.55□□□□□ -0.08
SF3B3-202ENST00000562722 MEIS3P2A8K0S8 358 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 CDKL5O76039 1030 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 EPCAMP16422 314 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 QARSP47897 775 aaKnown RBP14.54□□□□□ -0.08
SF3B3-202ENST00000562722 NPEPPSP55786 919 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 TCF15Q12870 199 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 GIT2Q14161 759 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 ATAT1Q5SQI0 421 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 B3GNT9Q6UX72 402 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 DDX53Q86TM3 631 aaKnown RBP14.54□□□□□ -0.08
SF3B3-202ENST00000562722 CABP7Q86V35 215 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 MBOAT7Q96N66 472 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 FAM193BQ96PV7 902 aaPredicted RBP14.54□□□□□ -0.08
SF3B3-202ENST00000562722 CEP89Q96ST8 783 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 TRAIPQ9BWF2 469 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 NRDE2Q9H7Z3 1164 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 CYP26B1Q9NR63 512 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 PDRG1Q9NUG6 133 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 SORCS3Q9UPU3 1222 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 PCDHB2Q9Y5E7 798 aa14.54□□□□□ -0.08
SF3B3-202ENST00000562722 M0R2N6 131 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 EML1O00423 815 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 CCNT1O60563 726 aaKnown RBP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 OFD1O75665 1012 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 PDGFBP01127 241 aaPredicted RBP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 SSBP05455 408 aaKnown RBP eCLIP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 GALTP07902 379 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 SRGAP2CP0DJJ0 459 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 CTSAP10619 480 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 XBP1P17861 261 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 AVPR2P30518 371 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 SLC11A1P49279 550 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 PPP2R5CQ13362 524 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 KANK3Q6NY19 840 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 NEK8Q86SG6 692 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 UBALD2Q8IYN6 164 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 FAM177A1Q8N128 213 aaPredicted RBP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 BCL7CQ8WUZ0 217 aaPredicted RBP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 PSPC1Q8WXF1 523 aaKnown RBP14.53□□□□□ -0.08
SF3B3-202ENST00000562722 TMEM143Q96AN5 459 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 FAM86C1Q9NVL1 165 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 DNAJB4Q9UDY4 337 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 WDR81Q562E7 1941 aa14.53□□□□□ -0.08
SF3B3-202ENST00000562722 GCFC2P16383 781 aaKnown RBP14.52□□□□□ -0.09
SF3B3-202ENST00000562722 RFC5P40937 340 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 NPY5RQ15761 445 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 NCAPH2Q6IBW4 605 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 KIAA1841Q6NSI8 718 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 TMC5Q6UXY8 1006 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 PPFIBP1Q86W92 1011 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 ZNF280BQ86YH2 543 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 EXOC8Q8IYI6 725 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 PRPF31Q8WWY3 499 aaKnown RBP14.52□□□□□ -0.09
SF3B3-202ENST00000562722 ATOH1Q92858 354 aaPredicted RBP14.52□□□□□ -0.09
SF3B3-202ENST00000562722 FAM20AQ96MK3 541 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 LXNQ9BS40 222 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 EMILIN2Q9BXX0 1053 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 IRF2BPLQ9H1B7 796 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 RSAD1Q9HA92 442 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 IFT122Q9HBG6 1241 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 AGPAT5Q9NUQ2 364 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 VAV3Q9UKW4 847 aa14.52□□□□□ -0.09
SF3B3-202ENST00000562722 WDFY4Q6ZS81 3184 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 ZNF623O75123 536 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 ERLIN2O94905 339 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 BRD1O95696 1058 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 P4HBP07237 508 aaKnown RBP14.51□□□□□ -0.09
SF3B3-202ENST00000562722 ASGR2P07307 311 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 KLRC2P26717 231 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 LAMTOR4Q0VGL1 99 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 PTPN14Q15678 1187 aa14.51□□□□□ -0.09
SF3B3-202ENST00000562722 PIK3AP1Q6ZUJ8 805 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms