RNA–Protein interactions for RNA: ENST00000539479.5

MDM2-225, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-225ENST00000539479 KCNN1Q92952 543 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 ATP6V0A1Q93050 837 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 TMEM143Q96AN5 459 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 CEP170P1Q96L14 293 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 ZNF830Q96NB3 372 aaPredicted RBP6.92□□□□□ -1.3
MDM2-225ENST00000539479 SRRTQ9BXP5 876 aaKnown RBP6.92□□□□□ -1.3
MDM2-225ENST00000539479 HAPLN2Q9GZV7 340 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 NAT10Q9H0A0 1025 aaKnown RBP6.92□□□□□ -1.3
MDM2-225ENST00000539479 ABHD16BQ9H3Z7 469 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 MLXIPQ9HAP2 919 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 PARVGQ9HBI0 331 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 KCND2Q9NZV8 630 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 ZHX1Q9UKY1 873 aaPredicted RBP6.92□□□□□ -1.3
MDM2-225ENST00000539479 TRAF3IP3Q9Y228 551 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 IVNS1ABPQ9Y6Y0 642 aa6.92□□□□□ -1.3
MDM2-225ENST00000539479 KCNJ18B7U540 433 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ANKRD63C9JTQ0 380 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 GOLGA6L19H0YKK7 550 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 HAS3O00219 553 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ABLIM1O14639 778 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 TNPO2O14787 897 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 PSMA7O14818 248 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 EPHB6O15197 1021 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 EIF3DO15371 548 aaKnown RBP eCLIP6.91□□□□□ -1.3
MDM2-225ENST00000539479 SLC16A4O15374 487 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 TRPA1O75762 1119 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ZMYND10O75800 440 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 FAM13AO94988 1023 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 GCNT3O95395 438 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 C22orf31O95567 290 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 GH1P01241 217 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 GAP43P17677 238 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ADSSP30520 456 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 RGS2P41220 211 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 WNT7BP56706 349 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 MCCD1P59942 119 aaPredicted RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 ADAM17P78536 824 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 GTF2BQ00403 316 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 LRMPQ12912 555 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CAPSQ13938 189 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 KCNJ12Q14500 433 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 KNOP1Q1ED39 458 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 ODR4Q5SWX8 454 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 C1orf220Q5T0J3 134 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 KCNV1Q6PIU1 500 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 PLPPR4Q7Z2D5 763 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 TMEM139Q8IV31 216 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 DHX37Q8IY37 1157 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 MYCT1Q8N699 235 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CCDC155Q8N6L0 562 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 SNIP1Q8TAD8 396 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 ATP8B4Q8TF62 1192 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CACTINQ8WUQ7 758 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 SOCS4Q8WXH5 440 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CCDC34Q96HJ3 373 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CNOT6LQ96LI5 555 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 NTPCRQ9BSD7 190 aaKnown RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 TRIM5Q9C035 493 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 LRRC27Q9C0I9 530 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 POLR3FQ9H1D9 316 aaPredicted RBP6.91□□□□□ -1.3
MDM2-225ENST00000539479 ST6GALNAC4Q9H4F1 302 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ZHX3Q9H4I2 956 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 THAP9Q9H5L6 903 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 ARHGAP28Q9P2N2 729 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 SEL1LQ9UBV2 794 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 PYCARDQ9ULZ3 195 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 COL4A3BPQ9Y5P4 624 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 CASP8AP2Q9UKL3 1982 aa6.91□□□□□ -1.3
MDM2-225ENST00000539479 A6NJR5 290 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 LGALS16A8MUM7 142 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CLIC2O15247 247 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 MEFVO15553 781 aaPredicted RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 TBCAO75347 108 aaKnown RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 MAFO75444 373 aaPredicted RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 AKAP3O75969 853 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 KRT18P05783 430 aaKnown RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 IQCF3P0C7M6 154 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 MAPTP10636 758 aaKnown RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 XRCC5P13010 732 aaKnown RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 ELNP15502 786 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CCND3P30281 292 aaPredicted RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 HOXC8P31273 242 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CLCN3P51790 818 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 MARSP56192 900 aaKnown RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 PEX3P56589 373 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 UBASH3AP57075 661 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 RTP1P59025 263 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 NKX3-2P78367 333 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CCZ1BP86790 482 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CCZ1P86791 482 aaPredicted RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 BEX3Q00994 111 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 APBA1Q02410 837 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 TNFAIP2Q03169 654 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 LRRC63Q05C16 580 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 CACNB2Q08289 660 aaPredicted RBP6.9□□□□□ -1.3
MDM2-225ENST00000539479 IRF5Q13568 498 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 LAMC2Q13753 1193 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 NFIL3Q16649 462 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 EDRF1Q3B7T1 1238 aa6.9□□□□□ -1.3
MDM2-225ENST00000539479 FAM102BQ5T8I3 360 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms