RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 TBC1D12O60347 775 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 ATP5OP48047 213 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 BEX3Q00994 111 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 PKN1Q16512 942 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 C4orf50Q6ZRC1 276 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 PPP1R13LQ8WUF5 828 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 TIPINQ9BVW5 301 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 NGRNQ9NPE2 291 aaKnown RBP16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 SNX9Q9Y5X1 595 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 OR1G1P47890 313 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 FXR2P51116 673 aaKnown RBP eCLIP16.93■□□□□ 0.31e-6■■■■□ 23.7
PPFIA1-222ENST00000532504 ACVR2BQ13705 512 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 METTL7BQ6UX53 244 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 SREK1Q8WXA9 508 aaKnown RBP16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 CAPNS2Q96L46 248 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 PRG3Q9Y2Y8 225 aaPredicted RBP16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 CSDE1O75534 798 aaKnown RBP16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 NPTXRO95502 500 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 OAZ1P54368 228 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 ZBED6P86452 979 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 LRRC8AQ8IWT6 810 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 MICALL1Q8N3F8 863 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 ANKEF1Q9NU02 776 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 KLK14Q9P0G3 267 aa16.93■□□□□ 0.3
PPFIA1-222ENST00000532504 ANKRD40Q6AI12 368 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 TRIM11Q96F44 468 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 CALN1Q9BXU9 219 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 SHPRHQ149N8 1683 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 NDC80O14777 642 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 MED24O75448 989 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 DYNLT1P63172 113 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 CCNYQ8ND76 341 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 CPSF3Q9UKF6 684 aaKnown RBP16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 SPDYE16A6NNV3 312 aaPredicted RBP16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 STK4Q13043 487 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 NTRK3Q16288 839 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 RDM1Q8NG50 284 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 ZNF560Q96MR9 790 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 AGO4Q9HCK5 861 aaKnown RBP16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 DPYSL4O14531 572 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 SEZ6Q53EL9 994 aa16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 PRPF31Q8WWY3 499 aaKnown RBP16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 CWC15Q9P013 229 aaKnown RBP16.92■□□□□ 0.3
PPFIA1-222ENST00000532504 CYTH3O43739 400 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 FKTNO75072 461 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 HAUS4Q9H6D7 363 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 PRMT7Q9NVM4 692 aaPredicted RBP16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 PCDHB7Q9Y5E2 793 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 M0QYV0 167 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 KRIT1O00522 736 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 MAIP1Q8WWC4 291 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 SELENOSQ9BQE4 189 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 WDR18Q9BV38 432 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 USP2O75604 605 aaPredicted RBP16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 TMEM132DQ14C87 1099 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 PAN2Q504Q3 1202 aaKnown RBP16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 RUSC1Q9BVN2 902 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 INTS2Q9H0H0 1204 aaKnown RBP16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 ZNF148Q9UQR1 794 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 BAZ2BQ9UIF8 2168 aaKnown RBP16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 TRAPPC3O43617 180 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 ACTN1P12814 892 aa16.91■□□□□ 0.3
PPFIA1-222ENST00000532504 PPP2R5CQ13362 524 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 POLR3CQ9BUI4 534 aaPredicted RBP16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 MRPL47Q9HD33 250 aaKnown RBP16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 LMO7Q8WWI1 1683 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 CYP11B2P19099 503 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 XPAP23025 273 aaPredicted RBP16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 RIOX2Q8IUF8 465 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 AHDC1Q5TGY3 1603 aaPredicted RBP16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 PDXKO00764 312 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 GLRA4Q5JXX5 417 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 NOTUMQ6P988 496 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 ACRBPQ8NEB7 543 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 FBXL13Q8NEE6 735 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 NHEJ1Q9H9Q4 299 aaPredicted RBP16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 KCNK9Q9NPC2 374 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 ADAM22Q9P0K1 906 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 PRPSAP2O60256 369 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 ARL4AP40617 200 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 TMEM132BQ14DG7 1078 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 GPR142Q7Z601 462 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 MKL1Q969V6 931 aa16.9■□□□□ 0.3
PPFIA1-222ENST00000532504 SOWAHDA6NJG2 315 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 SERPING1P05155 500 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 SOX10P56693 466 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 ZNF484Q5JVG2 852 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 SAMD3Q8N6K7 520 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 C7orf25Q9BPX7 421 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 TINF2Q9BSI4 451 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 KCND2Q9NZV8 630 aa16.89■□□□□ 0.3
PPFIA1-222ENST00000532504 RSPH10B2B2RC85 870 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 C2CD2LO14523 706 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 PEX10O60683 326 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 PGK1P00558 417 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 RSPH10BP0C881 870 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 INSRRP14616 1297 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 RAG1P15918 1043 aa16.89■□□□□ 0.29
PPFIA1-222ENST00000532504 KYAT1Q16773 422 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms