RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 MUTYHQ9UIF7 546 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 COL4A3BPQ9Y5P4 624 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 PLXNA4Q9HCM2 1894 aa13.16□□□□□ -0.3
CTNNA1-237ENST00000523275 LOC730098B7Z3J9 87 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 SRGAP2CP0DJJ0 459 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 TECP42680 631 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 RAB27AP51159 221 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 BCAR1P56945 870 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 NR5A1Q13285 461 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 KCNC3Q14003 757 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 ME3Q16798 604 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 ERICH6BQ5W0A0 696 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 NCAPH2Q6IBW4 605 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 GLB1LQ6UWU2 654 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 MRPL43Q8N983 215 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 PSPC1Q8WXF1 523 aaKnown RBP13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 TNFRSF25Q93038 417 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 LPPQ93052 612 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 TMEM143Q96AN5 459 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 LXNQ9BS40 222 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 PHF7Q9BWX1 381 aaPredicted RBP13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 ZSWIM4Q9H7M6 989 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 FAM105AQ9NUU6 356 aa13.15□□□□□ -0.3
CTNNA1-237ENST00000523275 CARNS1A5YM72 827 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 FAM205CA6NFA0 338 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 NT5C1B-RDH14C9J2C7 533 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 ASAP2O43150 1006 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 EIF5BO60841 1220 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 HOXB8P17481 243 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 SPIRE1Q08AE8 756 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 LAMTOR4Q0VGL1 99 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 CTTNQ14247 550 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 BMS1Q14692 1282 aaKnown RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 CBX2Q14781 532 aaPredicted RBP13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 XKR9Q5GH70 373 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 NOMO2Q5JPE7 1267 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 ANKRD54Q6NXT1 300 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 LLGL2Q6P1M3 1020 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 SRGAP1Q7Z6B7 1085 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 TPH2Q8IWU9 490 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 TCP11Q8WWU5 503 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 SUSD6Q92537 303 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 GTF3C6Q969F1 213 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 PGBD4Q96DM1 585 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 TMEM169Q96HH4 297 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 DYDC2Q96IM9 177 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 PCDHA12Q9UN75 941 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 PCDHB2Q9Y5E7 798 aa13.14□□□□□ -0.31
CTNNA1-237ENST00000523275 C2orf71A6NGG8 1288 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 ZBTB39O15060 712 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 GAS2O43903 313 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 ZC3H11AO75152 810 aaKnown RBP eCLIP13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 OFD1O75665 1012 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 SLITRK3O94933 977 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 LARGE1O95461 756 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 CXCL14O95715 111 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 NEK4P51957 841 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 CYP4A11Q02928 519 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 RNASELQ05823 741 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 EMC2Q15006 297 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 SYCE2Q6PIF2 218 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 MRPL10Q7Z7H8 261 aaKnown RBP13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 EDAQ92838 391 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 MINDY3Q9H8M7 445 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 AGPAT5Q9NUQ2 364 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 TBC1D13Q9NVG8 400 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 INPP5FQ9Y2H2 1132 aa13.13□□□□□ -0.31
CTNNA1-237ENST00000523275 MEIS3P2A8K0S8 358 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 BTBD18B2RXH4 712 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 CLASP2O75122 1294 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 GALTP07902 379 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 HOXA11P31270 313 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 TRIM29Q14134 588 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 CALCRLQ16602 461 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 HFE2Q6ZVN8 426 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 DDX53Q86TM3 631 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 FERMT3Q86UX7 667 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 VPS52Q8N1B4 723 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 RNF149Q8NC42 400 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 NSUN7Q8NE18 718 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 CASP10Q92851 521 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 IGSF21Q96ID5 467 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 HSD17B14Q9BPX1 270 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 EIF2AK1Q9BQI3 630 aaKnown RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 BMP2KQ9NSY1 1161 aaPredicted RBP13.12□□□□□ -0.31
CTNNA1-237ENST00000523275 MUC6Q6W4X9 2439 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 LYPLA2O95372 231 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 CA8P35219 290 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 MXD4Q14582 209 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 TPRNQ4KMQ1 711 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 UBXN11Q5T124 520 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 AGMOQ6ZNB7 445 aa13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 TMEM173Q86WV6 379 aaPredicted RBP13.11□□□□□ -0.31
CTNNA1-237ENST00000523275 DIS3L2Q8IYB7 885 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms